Zingiber officinale (ginger): 122040603
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Entry
122040603 CDS
T08725
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00730
Thiamine metabolism
zof00900
Terpenoid backbone biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
122040603
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122040603
Enzymes [BR:
zof01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
122040603
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
Transketolase_N
PFOR_II
Transketolase_C_1
Motif
Other DBs
NCBI-GeneID:
122040603
NCBI-ProteinID:
XP_042455903
LinkDB
All DBs
Position
2A:complement(5156956..5160257)
Genome browser
AA seq
706 aa
AA seq
DB search
MEASSSPMAACQAPFLKSWSSAANQCGKRQFSVRASGDGKTVISKEMGGWRINCSGEKPA
TPLLDTVNYPIHMKNLSTKDLGQLSAELRAEIVYTMSKTGEQLSGGLGSVELAVALHHVF
DAPEDKIIWDVGHQAFPHKILTGRRSRMHTIRQTSGLSGFPKRDESVYDAFGAGHCSTSI
SAGLGMAVARDLLGKKNHVISVIGDGAVTAGQAFEAMNNAGYLDSNLIVVLNDNRKVSLP
AATLDAPEAPVGTLSKALTTLQSSPKLRMLREAAKCLTEQIGGQTHEIAAKVDEYARGLI
SASGSTLFEEIGLYYIGPVDGHNVEDLITIFEKVKSVPAPGPVLIHIVTEKGKGYPPAQA
VANKNHGVVKSDPKTRKQFKTKSPTLSYTDCFAQSLIKEAEADDKIVAVHAAMGTGTGLN
YFEDKFPDKCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLP
VRFALDRAGLVGGDGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAVAIDDRPSC
FRFPRGAGVGVPLPQGYKGTPLEIGKGRILMEGNGVAILGYGSIVQTCLKAADSLRAYGV
AATVADARFCKPLDVDLVRRLANEHEILITVEEGSIGGFGSHVMQFLSRKGFLDGRVKLR
SMVLPDRYINHGSPQDQFESAGLTSKHIAGTVLNLLGRPKEAFQLH
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaggcttccagttctcccatggcggcctgccaagctccattcctcaagtcttggagc
tcagctgcgaaccagtgcggcaagagacagttttctgtgagagcgagcggcgacgggaag
acggtgatcagtaaggaaatgggcgggtggaggattaattgttcgggggagaagccggcg
acccctcttctcgataccgtcaactatcctattcacatgaagaacctctccacaaaggat
ttggggcagttgtcggctgagctcagagcagaaatcgtgtacactatgtcgaaaactgga
gagcagttgagcggcggcttggggtcggtagagctggctgtggctcttcaccatgtgttt
gatgctcctgaagacaagatcatttgggatgtcggacatcaggccttccctcacaagata
ttgaccggaagaaggtcgaggatgcataccatcaggcagacctcggggctttctggattc
ccaaagagggatgagagcgtttacgacgcctttggtgctggtcactgctccacaagcatc
tcagcaggccttggaatggctgttgcaagagatttgctaggcaagaagaatcatgttatt
tcggtaataggggatggtgctgtgactgctggccaggcctttgaggccatgaacaatgct
ggctacttggattccaaccttattgttgtgttgaatgataataggaaagtttcacttcca
gctgcaacccttgatgcacctgaagctcctgttggaacactcagtaaagcccttaccaca
cttcaatccagccctaagttgcgaatgctccgcgaagctgctaagtgtctcacagagcaa
attggtggacaaacacatgagattgctgcaaaggtggatgaatatgcccggggattgatc
agtgcctctggctctacattgtttgaggagattggtctatattatataggaccagttgac
ggtcacaatgtcgaagatttgatcaccatctttgagaaggtgaagtcagtgccagctcct
ggtcctgttctcatccatattgtgacagagaaaggaaaggggtatccccctgctcaggct
gttgccaataagaaccacggtgttgtgaaatccgacccaaaaactaggaagcaattcaag
acaaaatcccccaccctttcatacacagactgctttgcacagtcactcatcaaagaggct
gaggctgatgacaagattgtggctgtgcacgcagccatgggaactggcaccgggcttaat
tatttcgaagataagttcccagataaatgcttcgatgtgggaatcgccgagcagcatgcg
gtcaccttcgcagctggtttggccgccgaaggcctgaagcctttctgcgccatatattca
tcgtttctgcaacggggatatgatcaggtggttcatgatgtggacttgcagaagcttcct
gtccggttcgcactggatcgggctggcctagtcggaggcgacggacctactcattgtgga
gctttcgacattacttacatggcatgcttacccaacatggtcgtgatggccccgtccgat
gaagctgagctaatgcatatggtagccacagcagtggcaattgatgatcgaccgagctgt
ttcaggttccctaggggtgccggagttggtgtgcccctgccgcagggctacaaaggaacc
ccactagagatcgggaagggtaggattctgatggaaggaaatggagtcgccatcctcgga
tatggttccatagtacagacatgcttaaaggctgccgactcactccgggcttacggagtc
gctgccacagtggctgatgcccggttctgtaaacctctggacgtggatctagtaagacgg
ctagcaaacgagcatgagatcctgatcactgtcgaggagggctcgattggaggtttcgga
tcacatgtcatgcaattcttgagccggaagggattcctggacggacgcgtcaagctgagg
tcgatggttctgcctgaccgctacatcaaccatggatcacctcaggaccaattcgaatcg
gccggtcttacttccaagcacatagcagggactgtgctcaatcttctgggcaggcctaag
gaggcatttcaactgcactga
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