Zingiber officinale (ginger): 122040658
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Entry
122040658 CDS
T08725
Name
(RefSeq) protein argonaute 4B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122040658
03036 Chromosome and associated proteins [BR:
zof03036
]
122040658
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122040658
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122040658
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122040658
microRNA pathway
RISC loading complex
122040658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
122040658
NCBI-ProteinID:
XP_042455997
LinkDB
All DBs
Position
2A:complement(9409334..9416370)
Genome browser
AA seq
912 aa
AA seq
DB search
MDPQVKPDPDNFDNLPPPPPPSIPPNVNPMKATKPKRTPMVRPGIGRKGNAVQLLTTHFK
VSLRNVDDYFYHYSVALRYEDDRPVDGKGVGRKVIDKLHQTYDTELGKRDFAYDGEKSLF
TLGALPHINNEFTVVLEDLSSNRIPGNGNAGNNSPGESDHKRARRPKHTKTFKVLLSFAA
KIPMKSIAAALKGNDTENSQEALRVLDIILRQHAAKQGCLLVRQSFFQNNPKSFTDIGGG
VMGCRGFHSSFRTSQGGLSLNIDVSTTMIVRPGAVVDFLLANQNVKNPNQLDWNKARRTL
KNLRVKTTHTNQEFKIIGISDKPCKDEIFTLKLRNGNDGNGNSDAVEVTVYDYFVRHRRM
QLSYSANFPCLNVGKPKRPTYVPLELCSLVSLQRYTKSLSTFQRASLVEKSRQKPRERMI
VLSEALRSNNYDADPLLHACGVSIATTFTQVEGRVLQPPRLRVGNGEEFMPSRGRWNFNQ
KKLMEPARITRWAVVNFSARCDVSSLIRDMLKCANMKGISMEEPFQHIFEENPSMRRAPP
VARVEEMFRQVKQIDPKFLLCILSERKNSDIYGPWKLKCLTADPGIISQCIAPTRVNDQY
LTNVLLKINAKMGGINSYLSLERSSAIPLVSDTPTIILGMDVSHGSPGHSDIPSIAAVVS
SRQWPSISRYRASVRTQSPKVEMIDSLFKPVIGNTGKKYDSGMIRELMVDFYISSGKRKP
ENIIIFRDGVSESQFTQVLNIEFDQIIEACKFLDEQWSPKFTLIIAQKNHHTKFFLPNSP
DNVQPGTVIDNKICHPKNYDFYMCAHAGMIGTTRPTHYHVLMDEIGFTVDSLQELVHSLS
YVYQRSTTAISVVAPICYAHLAAAQIGQFVKFEDLSDSSSSQGGQQHTAPGAIPVPELPR
LDKNVSSSMFFC
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcaggttaaacctgaccctgataacttcgataatttgccaccgccaccgcct
ccttccattcctcctaatgttaaccccatgaaggccacaaaacctaaaaggactccaatg
gttagacctggcattggaagaaagggcaatgctgtgcagcttttgacaactcattttaaa
gtttctctcaggaacgtggatgattatttttaccactacagtgtggcactgagatatgaa
gacgatcgtcctgtggatgggaagggtgttggaaggaaagttattgacaaactgcaccag
acatatgacactgagttaggaaaaagggattttgcatatgatggtgagaagtctctattc
acccttggtgcccttcctcacatcaataacgaattcactgtggtgcttgaggacctgtcc
tcaaacagaattcctggcaatggaaacgctggaaataatagtccaggtgaaagcgatcac
aaacgtgccagacgtccaaagcatactaaaaccttcaaggttttgttgagttttgcagct
aaaatacctatgaaatccattgctgcagccttgaaaggcaatgacacggagaactctcag
gaggctttacgggttcttgatattattctgcgacagcatgctgcaaaacagggatgtctt
cttgtgagacaatcattttttcaaaacaatcctaaaagctttactgacattggtggtgga
gtcatgggatgcagaggttttcattcaagtttcagaacttcacaaggaggactttctttg
aatattgatgtctctactactatgattgtgaggcctggcgcagtggttgactttctcctc
gcaaatcaaaatgtcaagaatccaaatcaactagactggaacaaggctagaagaactttg
aaaaatttgagagtgaagacaactcataccaatcaagaatttaaaatcattgggataagt
gacaagccttgcaaagatgaaatattcactctaaagctgagaaatggaaatgatggaaat
ggaaattcagatgcagttgaagtaactgtttatgattattttgtgagacatcggagaatg
caattgagttactctgctaattttccttgcttgaatgtcggaaagccaaaaagaccaaca
tatgtgccccttgagctctgctccttagtatcattgcaaagatataccaaatctctgtca
acatttcaaagagcttccctcgtggaaaagtcaaggcaaaagcctcgagaacgaatgatt
gtcctcagtgaggctttgaggagcaataattatgatgctgacccattgctacatgcatgt
ggcgttagcattgccaccacttttactcaagtagaaggtagagtattgcagcctccccgg
ctcagagttggcaatggagaggaatttatgccatcaagggggagatggaattttaaccaa
aagaaattgatggagccagctcgaatcacccgatgggctgttgttaatttctctgctcga
tgtgatgtttcaagcctcatacgtgacatgctcaaatgcgcaaatatgaaaggcatttca
atggaagaacctttccagcatatttttgaggaaaatccttcgatgagaagggcaccacct
gttgccagagtggaggaaatgtttcggcaagttaagcagattgatccaaagtttctcctc
tgcattttatctgagaggaagaattcagatatttatggtccatggaagctcaaatgtcta
actgctgatcctggaattatttctcaatgtatcgcccctacaagagtgaatgaccagtac
cttaccaatgtgctgcttaaaatcaatgccaagatgggtggtataaactcttacttgtca
cttgaaagatcatcagccattcctctagtctccgatacaccaacaatcattttgggtatg
gatgtttcccatggatctcctgggcattcggatattccttcaattgctgcggttgtaagc
tcaaggcaatggccatctatttctcgctatagagcttctgtgcgaacacaatctcctaag
gttgaaatgatagactcactttttaagcctgtaatagggaatacaggaaagaaatatgac
agtggcatgattcgggagctgatggtcgatttctacatcagttcaggaaaaagaaaacca
gaaaacattatcattttcagggatggtgttagtgaatcacagtttactcaagtcctcaac
attgaatttgatcaaattattgaggcatgcaagtttcttgatgaacagtggtctccaaag
tttacattgataattgcccagaaaaatcatcataccaagtttttccttccaaactcacct
gacaatgtccaacctgggacggttatcgataacaaaatttgtcatcctaagaactatgac
ttctacatgtgcgctcatgctggcatgattggcacaactcggcccactcattaccatgtg
ctaatggatgagattgggtttactgttgattccctgcaggagcttgttcattccctttct
tatgtatatcagaggagcacaactgcgatatctgttgttgcacccatctgttatgctcac
ttggctgcggcacaaattggacaatttgtgaaatttgaagatttatctgattcgtcatcc
agccaaggtggacagcagcataccgcacccggagcaattccagtgccggaacttcctcgt
ttagataagaatgtttctagttccatgttcttctgctga
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