Zingiber officinale (ginger): 122040720
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Entry
122040720 CDS
T08725
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Module
zof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122040720
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122040720
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
122040720
NCBI-ProteinID:
XP_042456082
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Position
1B:106143063..106145040
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AA seq
428 aa
AA seq
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MPSLAHKLACLILCILLLSKLHRCFGEEEAARSVLFEGDQPAIPLHDLRSAYAKLYQLLA
GMKVQAQEVINIDAYGANSQGYQKAWNAVCSSSTPAILTVPEKKNYVLQPIAFSGPCKSS
VTVMIKGSVEAPVDRSLWAGKRYWIMFSGVDNLSVGGGGVINGNGNVWWQNSCKIKKSSP
CVDAPTALTFNGCKNLRVENLRIQNSQQIHVSFQSCSDVDVSHLSITAPGTSPNTDGIHV
TETQSITISDSVIATGDDCISIVSGSANVMAKNIVCGPGHGISIGSLGSGNSQARVSDVT
VDTARLSGTTNGVRIKTWQGGSGYAKNIVFKNIVMQNVKNPIIIDQNYCDSNKPCHEQGS
AVEVGNVLYKNITGTSASEDAIALSCSKATPCHGIVLQDINLGHSTQSSCENAKWSKLGS
VVPSPCTN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcccttgcacataaattagcatgcctcatactttgcattctcttgctgagcaaa
ttgcaccgctgctttggagaagaagaggcagccagaagtgtcttgttcgagggtgatcaa
cctgcaatccctttgcatgacttgcggagtgcttatgccaaattatatcagctacttgca
gggatgaaggttcaagctcaggaggtgatcaatatcgatgcctacggtgccaattctcag
ggatatcagaaggcctggaacgcagtttgctcttcttccactccagccattttgacggtt
ccagaaaagaagaattatgttcttcagccgatcgccttctcaggcccttgcaaatctagt
gttactgtcatgatcaaaggatctgtggaagctccggtcgaccggtcgctctgggccggc
aagagatactggataatgttcagtggtgttgacaacctttcagtcggaggcggcggagtg
atcaacggcaatggcaacgtctggtggcaaaactcctgcaagattaaaaagtcttcacct
tgcgtggacgcacccacggcgttgacttttaacggctgcaagaacttgagggtagagaat
ctaaggattcaaaatagtcaacaaatccacgtgtcgttccaaagctgcagcgacgtcgac
gtatctcatctttcgatcactgctccaggaacaagtccgaacaccgatgggattcacgtc
acagaaacacagagcataaccatctccgattccgtcattgcaaccggtgacgactgcata
tcgatcgtgagtgggtctgctaacgtgatggccaaaaacatagtttgcggacctggccat
ggaatcagcatcggaagccttggaagtgggaattcccaggctcgcgtttctgacgtgact
gtggacactgcccgtctcagtggcaccaccaatggagtccggatcaagacgtggcaagga
ggtagtggatatgcaaagaacatagtgttcaagaacatagtcatgcaaaacgtcaagaat
cctataatcattgaccagaactactgtgactcgaataagccatgccatgaacagggatca
gctgtggaagtagggaatgtgctgtacaagaacataacaggaactagtgcttcagaggat
gctatagccctgagctgcagcaaggcaactccatgccatggcatagtgttgcaagatatc
aacttaggtcattccacacaaagctcctgtgagaatgcaaaatggagcaaattaggaagt
gttgttccttctccttgcaccaactag
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