Zingiber officinale (ginger): 122040748
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Entry
122040748 CDS
T08725
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 23 isoform X1
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122040748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122040748
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
122040748
Ubiquitin system [BR:
zof04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
122040748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
SH3-B_UBE2O
UQ_con
SH3-C_UBE2O
SH3-A_UBE2O
Motif
Other DBs
NCBI-GeneID:
122040748
NCBI-ProteinID:
XP_042456109
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All DBs
Position
2A:12776215..12786320
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AA seq
1199 aa
AA seq
DB search
MEKKHIDDGLSTSIKVSNVSDAKHKEKKSCSDAESSSECEKQKKIEELTISQTNDTFIYR
QDVIKSSKHEDFLGIVVEVAGDSDSEDSISDDDDSEMDEEKVDAGIGGGDNDNDNTNNDG
DNINYLPNGQVRITWCDGSETTENTSDIVVVDRSFLHGDIVTSVIDPTGQLGLVVNINIT
VELLSADGEVIKNVNSRDLKRIREFSAGDFVVLGPWLGRVDEVLDNVTVLFDDGSVCKVV
KADPLRLNPVLKPVVDNADCPYYPGQRVRAVSSAVFKTSRWLSGLWRSNLLEGTVIKVQT
GSVVVYWMASAYLGVGTSSTSAPADEQNPKNLTLLSFYAHTNWQLADWCLLPSYQQLSSS
ADSIRINSKMKEAVSDSISHVEENQLSSCILDEVSPTGTELEATDDCFLVHSSHCINSDI
PDSQCMLGKDIDGSSEVSSTSKEFHGHSHQSQSEDYLNDHLTAKLGQVDGTESTDFPEKC
SCSSPSISKEAVHESWPTYRKNLRKVFFKREKKTRRRNDNFESALFIINTVTKVDVAWQD
GRKEYGLQSTSLIPISTPNDNEFFPEQYVVEKASNEEDGSFEVCRTGVVRTVNSQERTVC
VRWLKPVSRPEDLKEFMCEEIVSAYELDPHPDYDYCYGDVVVCLPTTSDDSTKFEIPIKA
DGNQLDTEVISADSKKEYKGADKDTLVQNYDVCENVRSLSWVGTVIGLQDGDIEVNWADG
TISKVGPQEVYVVDGDDDEVSDDGASWETVDENEMDVLDGIEKEADLHDHSDNTIQKGKR
SETSQEDITGGRSGPLAVPLTALDFVTKFATGLFFRAKKQLNALGSDQIGGNNAECEMDL
AASESIVDVEDENKVSDVSDYNITQSTHQNSELMNNQEATTENVEINIHYPSVQPASIGP
DIGSRTSYDMDDPYNFKHFDVAENPSDHHYLGDAEKCSGQRKWVKKVQQEWSILEKNLPD
AIYVRVFEDHIDLMRAVIVGASGTPYHDGLFFFDFHLPPEYPEVPPSVYYHSGGLRINPN
LYVDGKVCLSLLNTWTGKGNEVWDSSASSILQVLISLQGLVLNDKPYFNEAGYEKQIGTV
EGEKNVIPYNENTYLMNLKSMMYLLRRPPMHFEDFVKDHFRRHGYYILKACEAYMAGSMI
GSLTTDGCPTEKSQEHSCSVGFKLTLAKILQRLILAFDEVGIDRCQFKHLLKSENPPES
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaacatattgacgatgggcttagtacttcaatcaaagtgagtaatgtatca
gatgcaaaacataaggaaaaaaaatcttgttctgatgctgagagtagttcagagtgtgaa
aaacaaaagaaaattgaggaacttactatttcccagactaatgatacatttatttataga
caagatgtcatcaaatcaagtaagcatgaagattttcttggaattgttgtagaagtggca
ggtgattcagactcagaggatagcatctcagatgatgatgacagtgaaatggatgaggaa
aaggttgatgcaggcattggtggaggcgacaatgataatgataatactaacaatgatggt
gataacatcaattatcttccaaatggacaagttagaataacttggtgtgatggttctgaa
acaacagaaaatactagtgatattgtggtagtagacagaagttttctgcatggtgatatt
gttacttcagtcattgatccaacaggacaattagggctcgttgttaacatcaatatcaca
gttgagttactttctgcagatggtgaggtgataaaaaatgttaactccagagatctaaaa
cgtataagggaattcagcgctggtgatttcgttgttcttggaccttggcttggcagagtt
gatgaggtgttagataatgtgactgttctgtttgatgatggatctgtatgcaaagtagtt
aaagctgaccctttgcgactgaatcctgttctgaagccagttgttgacaatgcagattgt
ccatactatccaggccaaagggttcgtgctgtttcttccgctgttttcaaaacttctaga
tggctttctggcttgtggagatctaaccttcttgaaggcacagtcatcaaagttcaaaca
ggctcagtggttgtctattggatggcttcagcttatctcggtgttggtactagttcaact
tccgcacctgccgacgagcagaatcctaagaacttgactctgttgtctttttacgcacac
acaaactggcaattagcagattggtgtctcctgccatcttaccagcaattatcatcttct
gctgatagcattcgaataaacagtaaaatgaaagaagctgtgagtgattctatttctcat
gttgaggaaaatcaattgagctcttgcatattggatgaagtatctccaactggcaccgaa
ctcgaggcaacggatgactgttttctggtccactctagccattgcataaactctgatatc
cctgattctcaatgcatgcttggaaaagatattgatggatcttctgaagttagttccact
tccaaagaatttcatgggcattcccaccagtctcaaagtgaagattacttgaatgatcat
ttaacagctaaattaggccaggtagatggaactgaatcaacagattttcctgaaaaatgc
tcatgcagtagtccttccatttcaaaggaggctgttcatgaaagctggccaacataccgg
aaaaatcttcgaaaagtcttttttaagagagagaagaaaactcgaagaagaaatgataac
tttgaaagtgcacttttcattataaacactgttacaaaggttgatgtggcttggcaagat
ggaagaaaagaatatgggctgcaatcaacatcattaattccaatatctacaccaaatgat
aatgaattttttcctgagcagtatgtggttgaaaaggcatcaaatgaagaagatggttct
tttgaagtttgtcgcacaggagtagtaagaactgtgaattctcaggagcgaactgtatgc
gtaagatggcttaaacctgtaagcaggccagaagatttaaaagagtttatgtgtgaagaa
attgttagtgcttatgaacttgatcctcatccagattatgattactgctatggtgatgtt
gttgtatgcttgcccacaacttctgatgattcaacaaaatttgaaattcctatcaaggca
gatggaaatcaacttgatacagaagtgatatccgctgattcaaagaaagaatacaaaggt
gctgacaaagatactctggtccaaaattatgatgtttgtgaaaacgtacgaagtctatca
tgggttggaactgtaattggtctccaagatggtgacattgaagttaactgggctgatggg
acgatctcaaaggtaggtcctcaggaagtttatgttgttgatggagatgatgatgaagtt
agtgatgacggtgccagttgggaaacagttgatgaaaatgagatggatgtacttgatggc
attgaaaaggaagctgatctacatgatcatagtgacaacactatccaaaaaggcaagaga
tctgaaacatcacaagaagatattaccggtggacgaagtgggccactcgcagtacctctt
actgctcttgattttgtgacaaaatttgctactgggctattttttcgagctaaaaaacaa
ttgaacgcattgggttcagatcaaattggaggaaataatgcagaatgtgaaatggatctt
gctgcttctgaaagcatagtagatgtggaggatgagaataaagtttctgatgtttctgac
tataatattactcaaagcacacatcagaattcagaattaatgaataatcaagaggcaaca
actgagaatgtggaaataaatattcattacccttcggttcaaccagcatcaataggacca
gatattggcagtagaacatcatatgatatggatgacccatataatttcaagcactttgat
gttgctgagaatccttccgaccatcattatcttggtgatgctgaaaagtgtagtggtcaa
aggaagtgggttaaaaaggttcagcaagaatggagtattctcgaaaagaacttacctgat
gctatttatgttcgagtatttgaggaccacatagatctaatgagagctgtgatagttgga
gccagtggaacaccatatcatgatggtctcttcttctttgattttcatctccctccagaa
tatcctgaagttccaccgtctgtatattaccattctggtggcttgcggataaacccaaat
ttatatgtggatggaaaggtttgcttaagcctgttaaatacatggacaggcaagggaaat
gaagtttgggattcatcagcttccagcatcctccaagtcctaatttcattacaggggttg
gttctcaatgacaagccgtactttaatgaagctggttatgaaaagcagattggaacggtt
gaaggggagaagaatgtcataccatacaatgagaacacgtacctaatgaacttgaaatca
atgatgtatcttttgagaagaccacccatgcattttgaagactttgttaaggatcacttc
cgcagacacggatattacattcttaaagcttgtgaggcttacatggcaggatccatgatc
ggctcccttactactgatggatgcccgacagaaaagagccaggagcattcttgttcagta
ggtttcaagttgacactcgcaaaaatcttgcagcggctgatacttgcattcgatgaagta
ggaattgatcgctgccaattcaagcatctactcaaatctgaaaaccctccagaaagttaa
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