Zingiber officinale (ginger): 122040865
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Entry
122040865 CDS
T08725
Name
(RefSeq) cullin-1-like
KO
K03347
cullin 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122040865
04120 Ubiquitin mediated proteolysis
122040865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122040865
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
122040865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
122040865
NCBI-ProteinID:
XP_042456262
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All DBs
Position
1B:complement(108044864..108050044)
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AA seq
745 aa
AA seq
DB search
MKKKRAVPKPILFGEGWEVIEQGVTKMKRILEGLPEPPFTCEEYMKIYTRIHDMCIQRSP
HDTTEKLYTKYKEVIMEYITSVVLPSLKDKHDEFLLRELVIRWSNHKVMSKWLSRFFSYL
NRFFIKRNSLPSLDEVAFTCFQDQVYKVTKGKVKDAVISLIDQERGGEQIDRGLLKNVIE
IFVEIGTDKMDYYKNDFEEEMLKETASYYSRKASNWILIESFPDYMLKVEECLRKEKDRV
VHYLHATSEPKLIEQVRHEVLCVYSSQLLENEKSGCCVLIQEHKVDDLSRMYKLFSKIDD
GLCRISQIYKKHVTVEGTTLVKKTDDVASNKEAEKRVVVGLQEQTFVREVIELHDKNMPL
VNDCFQNHTLFRKVLKEAFEIFLNKTVAGSSTAELLVNYCDNILKKGGSEKYSDEAIEQI
LEKAVNLLGYIYDKDLFVEFYRKKLARRLLFDKSANEDHERSILTKLKQQNGTHFTSKLE
GMVTDMTLARETQADFKDYLQCNPRTNPGIDLSVTVLTTGFWPSYRSSDFHLPFEMTKCI
QAFAEFYPTKTNSRKLTWIYSLGTCNITAKFELQTIELIVTTYQAAVLLLFNDSDRLSYS
EIMSQLNLADDDVVRLLQSLCCLKYKLLNKEPNTNSISSDDVFAFNSKFTNKMRRIRIPL
PIVDEKKKILEVVDKDRKYVVDACLIRIMKSRKVLNHQQLITECVEQLKVFKPDLKLIKK
RIEDLINREYLERDSENLNLYRYLA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaaagggcggtgccgaagccgatccttttcggcgaagggtgggaggtcatc
gagcaaggcgtcaccaagatgaagaggatcttggaagggcttcccgaaccgcctttcaca
tgcgaggaatacatgaagatctacacaagaatccacgatatgtgtatccaaaggtctccg
cacgataccacggagaaattgtacacaaagtacaaggaagtgatcatggagtatataact
tccgtggtattgccctctttgaaggacaagcatgatgagtttttgttaagggaactggtc
ataagatggtcaaatcataaagttatgagcaaatggctttcacgttttttttcgtacctt
aatcgatttttcatcaagcggaactcacttccatcacttgatgaagttgcatttacatgt
tttcaagaccaggtttataaggtgactaaaggaaaagttaaagatgcagtcatttctttg
attgatcaagagcgcggtggtgaacaaattgataggggtttgttgaagaatgttattgaa
atttttgttgaaattggaacggacaagatggattattataaaaatgattttgaagaagaa
atgcttaaagaaacagcatcctattactctagaaaagcttcaaattggattctcatcgaa
tcattcccagattacatgttaaaggttgaggagtgcttaaggaaggagaaggatagggtc
gttcattatttgcatgctactagtgaaccaaaattgatagagcaagtgcgtcatgaggtt
ctatgtgtttattcaagccaacttttggaaaatgaaaagtctggttgctgtgtcttaatt
caagaacacaaggtggatgatctctcacggatgtacaagcttttttcaaagatagacgat
ggcctatgtcgtatctctcaaatttataagaagcatgtgactgttgagggtacaacttta
gttaaaaaaacagatgatgttgcaagtaataaggaggcagagaaaagggttgttgttggc
ttgcaagaacagacttttgttagggaagttattgaacttcatgacaagaacatgccactc
gtgaatgattgtttccaaaatcatactcttttccgtaaggtactcaaagaggcatttgag
atttttctcaataagactgttgctggtagctcaactgctgagttactggttaactattgt
gataatattcttaagaagggtggaagtgagaaatatagtgatgaagcaattgaacaaata
cttgaaaaggctgtgaatttgcttggttatatctatgacaaagatttatttgttgagttc
tataggaaaaagcttgctaggaggttgttattcgacaaaagtgctaatgaggaccatgag
agaagcatcttaacaaaactaaagcaacaaaatggtacacattttacctcaaagttggag
ggaatggtaactgatatgaccctcgctagagaaacacaagctgattttaaggattatctt
caatgtaatccacgtacaaatccagggatagatttatcagttactgttttgacaactgga
ttttggccatcttatagatcatctgatttccaccttccatttgaaatgactaaatgtata
caagctttcgcggagttctatccgacaaaaacaaacagtagaaagctcacatggatatat
tctttggggacatgcaatattacagccaagttcgaattgcaaaccatagagcttattgtg
acaacatatcaggctgcagttcttctgctctttaatgactcagatcgattaagctactcg
gagatcatgtctcagcttaatttagccgatgacgatgtagtcagattgcttcaatccctt
tgttgcttgaaatataaacttctgaataaagaaccaaatacaaattctatttcttcagat
gacgtctttgcgttcaattcaaaattcaccaacaaaatgagaaggatcaggatacccctt
ccaattgtggatgaaaaaaagaaaatacttgaagtcgtggacaaggatagaaagtatgtt
gttgatgcctgcctgattcgcattatgaaaagtcgcaaagtattgaatcatcaacagttg
attacagaatgtgtcgaacaacttaaagtgttcaagcctgacttgaaactaattaagaag
cgtattgaagatttgataaatagagaatatctagagagagactcggagaatctgaatctg
tacagatacttggcttga
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