Zingiber officinale (ginger): 122040908
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Entry
122040908 CDS
T08725
Name
(RefSeq) recQ-mediated genome instability protein 1-like isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122040908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
122040908
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
122040908
FA (Fanconi anemia) pathway
122040908
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Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
122040908
NCBI-ProteinID:
XP_042456329
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Position
2A:complement(19884079..19946763)
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AA seq
577 aa
AA seq
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MLRRHLRLPSSSEDDEDAPPPQTLITPNPNTLLEISDDDFLDVPDDLSPPVVEAPPGRAG
DSADAPGGMEEERDGFTREIDDFLRSLGLRLRPEWLESCAATLMASGSDFSRLDVAGRAK
RCFEQFLISDMNTSGAGVLPEYVHRLHKTELEGPFVLQIDEIVNISAPIRERYHEVPVGY
KRCLKLSMTDGVQRVFGMEYRPIKELEVLASSGLKVVVHNVHIRRGLLMLVPEIFTVLGG
LVEDLDAARKRLVAEVNKPPRGKRKRGNISPLSTRACLAAWPSNNVLGAPTNSTTLNSQV
LDQGTNLVSAGIVTARTTIPEFVELGTTIQDDPCIVRHSNEVVAAQSARIPLREEYSAHI
EENITEGPACHGNRSDMLSNSTHNPLSTMEHAHSSDVEDAVEIEHPLILSDLDSIPFTYL
ACLFAKWTTEKDKIPPIHGRIKCFLTGVKGFQFKERRTYELSVYVDDGSLISEVLIDHKV
VQNGIGHSPEEVTAALSSTEKRIVADMRETMKKFQLFLAKFEGTMLLEMNKSSSLPVVLE
MNQGISSSDACLLLKRLEKTVSQEFSNRNLNLIELSP
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaaggcacctccgtttgccgagttcttctgaggacgatgaagacgccccacca
ccccaaaccttgatcactccgaaccctaacactctgttggagatctccgacgatgatttc
ttggacgttccggatgatctttcaccaccagtggttgaagccccacccggccgcgctgga
gactccgccgacgcacccggagggatggaggaggagagggatggttttaccagagaaatt
gatgactttctcaggagtctaggattacggctccggccagaatggctggagtcgtgcgcc
gcaactttgatggccagtggatcagatttttcccgtctggatgtcgccggaagggccaaa
aggtgcttcgaacagttccttatttccgacatgaatacttccggtgccggcgtccttcca
gaatatgttcacagattgcacaagaccgagctcgagggcccgttcgttcttcagattgat
gaaattgttaacatctctgcccccattcgagaaagatatcatgaagtaccagttggatat
aagagatgtctaaaattgtcaatgacagatggtgtgcaacgcgtatttggcatggaatac
agacccattaaagagcttgaggttcttgcttcttctggtctgaaggttgttgttcataat
gtgcatatacgacgagggcttttaatgcttgtcccagaaatttttacggtgcttgggggc
ctagttgaggatttagatgcagcaaggaagaggcttgttgctgaagtaaataaacctcca
cgaggcaaaaggaagcgtggtaatataagtccattgtctacaagggcttgtcttgcagca
tggccctccaacaatgttttaggtgcaccaacaaattcaacaacactaaattcgcaagta
ttggatcaaggtaccaatttggttagtgctgggatagtcactgcacgtaccacaatccca
gaatttgttgaactgggtactacaattcaagatgatccctgtattgtgagacacagcaat
gaagtagttgctgctcagagtgctaggatccctctaagagaagaatactctgctcatatt
gaagaaaatattactgagggacctgcttgccatggaaacagatcggacatgctatctaat
tcaacccataatcctctctctaccatggagcatgcccattcttcagacgtggaagatgca
gttgaaatagaacatcccttgattctaagtgacttggattcaatccctttcacatatctg
gcttgtttatttgctaaatggaccacagagaaagacaagataccaccgattcacgggagg
attaagtgttttttgactggtgtgaaaggatttcaattcaaagaaaggagaacatatgaa
ctcagtgtttatgtggatgatggaagtctaatatcagaggtcctcattgatcacaaagtt
gtgcagaatggaataggccattctccagaagaagtaactgctgctctttcttccacagaa
aagagaatagttgctgatatgagggagacaatgaaaaagttccaacttttcttggccaag
tttgagggcacaatgcttctggagatgaataaaagttcttctcttcctgttgtccttgag
atgaatcaaggaatttctagctctgatgcatgcctgctcctcaaaagattggagaagact
gtttcacaagaattttcaaaccgcaatttgaatctaattgagttatctccttga
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