Zingiber officinale (ginger): 122040963
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Entry
122040963 CDS
T08725
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial-like
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zof03032
]
122040963
03400 DNA repair and recombination proteins [BR:
zof03400
]
122040963
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
122040963
DNA replication proteins [BR:
zof03032
]
Prokaryotic type
DNA Topoisomerases
122040963
DNA repair and recombination proteins [BR:
zof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
122040963
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
HTH_37
DUF7180
Motif
Other DBs
NCBI-GeneID:
122040963
NCBI-ProteinID:
XP_042456395
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Position
2A:complement(25665401..25730386)
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AA seq
627 aa
AA seq
DB search
MALSTMRRLGSSSIFLSRCRPLLLFPAISASLPSSRRVFVELHPLSAASTLAVRRVSSKG
SDREEESSITARLGEVGDRGGRNGGLMVEEHSGAQEGMVIPAELPKEAKEAYMAYALSVL
VGRALPDVRDGLKPVHRRILYAMHELGLSSHKPFKKCARVVGEVLGKFHPHGDTAVYNSL
VRMAQDFSLRCPLIRGHGNFGSIDADPPAAMRYTECRLEALAEAMLLTDLDLNTVDFVPN
FDSSQKEPSLLPARIPNLLLNGSSGIAVGMATNIPPHNLGELVDALSALIRNPEATLQEL
LEYMPGPDFPTGGIILENFGILETYRTGRGSIMVRGKTDVEILDEKAKRSAIIIKEIPYQ
TNKPALVEKIAELVEHKILDGICDIRDESDRSGMRIVIEVTEKGSDPSIVLNKLYQHTTL
QSSFSCNMVGILDSQPKLMGLKELLQVFLEFRSSVIERRARFKLSQALERKHIIEGIIIG
LDNLDDIINIVRETSSNTLAIAALVKGYNLSEKQAEALMDIALRKLTLLERKKFMDEEKS
LSKQISYLNELLSSKNLIFKLIEKEAIELKHKFGSPRRSLIEDSRSSQLDEINNIPKRCK
KVGNQVAKGEIARPQRPRRTRPKEESR
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggctctctccaccatgcgccgcctcggctcttcctccatctttctttctcgctgtcgc
cccttgctcctcttccccgccatctcggcgtcgctcccatcttcccgccgcgtcttcgtc
gaacttcatcctctctccgccgcgtcgaccctggccgtccggagggtgagttcgaagggg
agcgaccgggaggaggaatcttccattacggcgaggttgggggaggtgggcgacaggggt
ggccgtaatggtgggctgatggtggaggagcacagtggcgcccaggaaggaatggttatc
cctgcagagctccccaaggaggccaaagaggcgtacatggcgtatgccctgtcggtgctg
gtcggtcgtgctttgccggatgtacgggatggtttgaagccggtgcacaggaggatactg
tatgcaatgcatgaactgggtctttcgtctcataagccttttaagaaatgtgctagggtt
gtcggagaggttttaggtaagtttcatccccatggagatacagcggtttataattctctt
gttcgaatggcgcaggatttctctctcagatgccctctcattcgtggacatggtaacttt
gggtcaatagatgctgatcctcctgctgcaatgagatatacagagtgcagattggaagca
ctagctgaggctatgctcttaacagatttggacctgaatactgttgactttgttcccaat
tttgacagctcacaaaaagaaccttctctcttgcctgctcgtattccaaatttgctgtta
aatggatcttctggaatcgctgttggaatggctacaaatatacctccccacaaccttggg
gaacttgtagatgcactttctgctctgatccgaaatcctgaggctactctccaagaattg
ctggaatatatgcctgggcctgactttcctactggaggaataattttagaaaattttggg
atcttggaaacatataggacaggacgaggcagcataatggtgagagggaagactgatgtg
gaaatacttgatgagaaagccaaacgcagtgccataataattaaggagattccttaccag
acaaataaacctgctctagttgagaaaattgctgaacttgtggagcataagattttagat
ggtatatgtgatattcgcgatgaaagtgaccgctctggaatgcgtattgttattgaggtc
actgaaaaagggtcagatccatcaattgttctcaacaaactttatcagcatactactctt
cagtctagttttagctgcaacatggtaggtattcttgattcgcagccaaagctgatgggc
ttgaaggaattgcttcaggtgtttcttgaatttaggagttctgtcattgaaagacgtgca
agatttaagcttagtcaagctttagaacgaaaacatattatagagggcatcattattggt
cttgataacttggatgacattataaatatagtcagggaaacatctagtaacactctggct
atagctgctttagtgaaagggtacaatttatctgaaaagcaagctgaagctttgatggac
attgctttgaggaaacttactcttcttgagagaaagaagtttatggacgaagaaaaatca
ttatcaaaacaaatttcttatctaaacgaactcttgtctagtaagaatcttatcttcaag
cttatagagaaagaagcaattgagttgaagcataaatttggaagcccaaggcgttcattg
attgaagattcaaggagtagtcaacttgatgaaataaataatattcctaagagatgcaag
aaagtaggtaatcaagtggcaaaaggcgaaatcgctcgcccccagcgcccccgccgcacc
cgacccaaggaagaaagtaggtaa
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