Zingiber officinale (ginger): 122041017
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Entry
122041017 CDS
T08725
Name
(RefSeq) ABC transporter B family member 4-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122041017
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122041017
04147 Exosome [BR:
zof04147
]
122041017
04090 CD molecules [BR:
zof04090
]
122041017
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122041017
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122041017
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122041017
CD molecules [BR:
zof04090
]
Proteins
122041017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
AAA_16
AAA_21
RsgA_GTPase
AAA_15
DUF87
AAA_30
DEAD
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
122041017
NCBI-ProteinID:
XP_042456470
LinkDB
All DBs
Position
2A:34987709..34998170
Genome browser
AA seq
1278 aa
AA seq
DB search
MGEESQKRALVEEEEDNNNKKKKKKKEKDEQYVAFHRLFAFADTRDMVLMVVGTISAVAN
GMAMPMMTLIFGQIINAFGDATRDTVLHQVSEVVLKFVYLGLGTSVAALLQVSFWMVTGE
RQAARIRALYLETILKQDIAFFDKEMTSGEAMQRMSGDTLLIQEAIGEKVGKFIQLMSTF
VGGFIVAFLKGWLLALVMLSCLPSIIIAGATMTWVITKLSSRGQAAYSEAANIVEQTIGC
IRTVVSFTSEERSVELYKKSIKTAYRSFVQEGVASGLGIGVLVLVVFCSYGMATWYGAKL
IIDKGYNGGMVINVMIAIMVSGMSLGETSPCISAFAAGRAAAYRMFETIKRKPEIDSNST
SGIVLEDVKGKIELKDVHFSYPMRPEQLVFNGLSLCVPSGTSMAIVGESGSGKSTVISLI
ERFYDPQAGEVLIDGINLKTLRLRHIREKIGLVSQEPVLFGTTIKENIAYGRENATLEEI
KRASELANAARFIDKFPNGLDTTVGEHGTQLSGGQKQRIAIARAILKDPKILLLDEATSA
LDTESERIIQDALSRIMSERTTIIVAHRLSTVRNADTITVLHEGKVVEQGSHSTLIKDSN
GAYSQLIRLQAIHREEENSTENERRGPKIDATKSNSASFGRISLNRSCSRGSSLGGSSRH
TFNLGFGLPGSVDVQDGNFMVEEDKERLTGHDKLGKNTPVRRLAYLNKPETPILILGSIA
SAVYGVVFPVFGILISSSIKTFFEPAHELRKHARFWALMYLILGLIALLSSAFQYFFFAI
AGGKLVERIRALSFQKVVHQEIGWFDEPSNSSGAIGSRLSVDAAIVRSLVGDNLAMMVQS
ISTVTAGIVIALVANWRLTLIIIVVIPLVGFQGYLQIKFLKGFSADAKAMYEEASQVASD
AISSIRTVASFSAERRVMDAYKEKCEAPLKHGIRRGIASGLGFGFSSMILYFTYALCFYV
GARFVKNGLVDFNEIFRIFFCLTVATIVSSNTSALGPDTTKAKASAASIFSIIDRKSNID
SSSGEGVVLTNVMGDIEFLHVMFKYPARPVQIFTDLCLTISSGKTVALVGESGCGKSTAI
ALLERFYDPDSGSISFDGIDIKMLKVKWLRQQMGLVSQEPVLFNDTIRANIAYGKEGAVT
EEEIVAAAEIANAHHFVSGLPQGYETLVGERGIQLSGGQKQRVAIARAILKNPKVLLLDE
ATSALDAESEHVVQEALDHAMVGRTTLIVAHRLSTIKGANTIAVLKNGVIVEKGSHETLI
DRKDGVYASSVSLYMSSS
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaaagccagaagagagcgttggtggaggaggaagaggataataataataag
aagaagaagaagaagaaggagaaggatgagcagtatgtggcgtttcacagactgttcgcc
ttcgccgacacccgcgacatggtgctgatggttgtcggcaccatttcagcggtcgccaac
gggatggccatgccgatgatgaccctcattttcggccaaatcatcaacgccttcggcgac
gctaccagggacaccgtgcttcaccaagtctccgaggtggttttgaagtttgtatatttg
ggtctcggaacatcagtagctgcccttctacaggtttcattctggatggtgaccggagaa
agacaagctgcacgaattcgagcattatacctggaaactatacttaaacaggatatagcc
ttctttgataaggaaatgactagtggagaagcaatgcagagaatgtctggagacacatta
ctcattcaagaggctattggtgaaaaggttgggaagttcatacaactcatgtccactttt
gttggtggctttatcgttgcatttctaaaagggtggcttctagcacttgttatgctttct
tgtttgccttccattatcattgctggtgcaaccatgacatgggtgataacaaaattgtcc
agccgtgggcaagcggcatattctgaagcagccaatattgtggaacagaccattgggtgc
atcagaactgttgtctcattcactagtgaagaacgctcagttgaactatacaagaagtcc
ataaaaactgcatatagatcttttgttcaggaaggtgtagcttctggcttgggaattggt
gttcttgtattggttgtgttttgtagctacgggatggctacttggtatggcgccaaactg
atcatagacaaaggttacaatggtggaatggtgatcaatgtgatgattgcaattatggtc
agcggaatgtctttgggtgagacgtcgccatgtatcagtgcatttgcagctggtagagct
gcagcttacagaatgtttgagacaatcaaaaggaaacctgaaattgattctaacagtaca
agtggaatcgtcttggaagatgttaaaggcaagattgaactgaaagatgtgcacttcagc
tatccaatgaggcccgagcaactggtatttaatggattgtcattgtgtgttccgagtgga
acctcaatggccatagttggagaaagtggatccggaaaatccactgtgattagtctcata
gagagattctatgatcctcaagcaggtgaagtgctgatagatggcatcaacctgaagacc
ctgagactccgacatatacgagaaaaaattggattagtaagtcaggagcctgttttgttc
ggaacaactatcaaggagaacattgcatatgggagggaaaatgcaacacttgaagaaata
aaaagagcaagtgagcttgctaatgctgcaagattcattgacaagttccccaatggtctg
gatacaacagttggtgagcatggaacacagctctctggtggacaaaaacaacggatagca
attgccagagcaatcctcaaagatcccaagatcttgttacttgatgaagcaacaagtgct
ttagatacagaatctgagagaataattcaagacgcattaagtaggatcatgtcagaaaga
actacaataattgtagcacatcgcttgagcactgtgaggaatgctgacaccataactgtt
ctgcacgaaggaaaagttgtagaacaaggttctcattcaactttaataaaagattccaac
ggtgcttactctcaactcatacgtttacaagcgattcaccgagaagaagagaattcaact
gagaatgaaaggcgtggaccaaagattgatgctacaaaatctaatagtgcatcctttgga
cggatatccctaaacagatcgtgtagcagaggttcttcattgggtgggagcagtcgtcac
acttttaatttaggatttggtctgcctggctctgttgatgtacaagatggaaattttatg
gtagaggaagataaagaaaggttgactggtcatgataagcttggcaagaacacccccgtc
aggagacttgcttatctcaacaagccagagacaccaattctgattttgggatccattgca
tcagcagtgtatggagtagtcttcccagtttttggaattctcatttctagttcaataaag
acattctttgagccagcacatgaactacgaaagcatgcgagattttgggcattgatgtac
ctgatcttgggcctcattgctttgctttcttcggcattccaatatttcttctttgctatt
gcgggcggaaagttggttgagcgcatccgtgctttatcatttcagaaagttgttcaccaa
gaaattggttggtttgatgaaccttcaaattcgagtggcgcaattggttcaaggctatca
gtagatgctgcaattgttcgaagtctcgttggagataacttggccatgatggtgcagagc
atatcgacagttactgcagggattgttattgcgctagtcgcaaactggagactaactcta
attattattgttgtcatacctctggtgggttttcaaggttatcttcaaataaagttcttg
aagggcttcagcgcagatgctaaggctatgtatgaagaagctagtcaagtggcaagtgat
gcaatcagcagtatacgaacagttgcctctttttctgctgaaagaagggtgatggacgca
tacaaagagaaatgtgaagctcccttgaaacatggcattcgtcgagggattgccagtggt
ttaggctttggcttctcatccatgatactttatttcacatatgccctttgcttttacgtc
ggagcaagattcgtcaaaaacggcttggtcgattttaatgaaattttcagaattttcttt
tgcttaacagtggcaacaattgtaagttcgaacacaagtgcactaggtcctgataccact
aaagctaaagcttcagctgcttcgattttctcaatcattgatagaaagtccaacattgat
tcaagcagcggagagggtgtggttttaacgaacgtaatgggcgacatagagttcctgcac
gtcatgttcaagtatccggctcgccctgttcaaatcttcaccgacttgtgcttgactatt
agttcaggaaagactgttgcgctcgtcggggaaagcggttgtgggaaatcaacagcaatt
gcactattggagagattctatgacccagattcaggtagtatttcatttgacggaatagat
atcaagatgcttaaagtaaaatggctaaggcaacaaatgggtttggttagccaagagccg
gtattattcaatgacacaattcgagccaacatagcatacggcaaggaaggagctgtgaca
gaagaagagattgttgcggctgcagaaatagccaatgcacatcactttgtatcaggtttg
cctcaaggatatgaaacgttagtaggagaaagaggcatccaactttctggcggccaaaaa
caacgcgttgcaattgctcgtgccattttgaagaatcctaaggttttgctactagatgag
gcaacaagcgctctggatgccgaatcagaacatgtggtacaagaagcattagatcatgct
atggtcggtagaacaacattgattgtggcgcaccgcctatcaacgataaagggtgctaac
acaattgcagttctcaagaacggcgtcattgttgagaaaggcagccatgaaaccttgatt
gatcgcaaagatggagtttatgcttcctcggtatcactttatatgagctccagttga
DBGET
integrated database retrieval system