Zingiber officinale (ginger): 122041018
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Entry
122041018 CDS
T08725
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B-like isoform X1
KO
K03064
26S proteasome regulatory subunit T4
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
122041018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
zof03051
]
122041018
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
122041018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
Prot_ATP_ID_OB_C
AAA_2
RuvB_N
AAA_16
AAA_22
AAA_7
PRS7_OB
AAA_14
TIP49
nSTAND3
Mg_chelatase
RNA_helicase
AAA_28
Parvo_NS1
AAA_24
Sigma54_activat
NPHP3_N
ATPase
AAA_18
DUF815
AAA_3
TsaE
NACHT
ABC_tran
IstB_IS21
eIF-1a
bpMoxR
Motif
Other DBs
NCBI-GeneID:
122041018
NCBI-ProteinID:
XP_042456472
LinkDB
All DBs
Position
2A:complement(35008443..35021251)
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AA seq
413 aa
AA seq
DB search
MSDGGGDAASRQKAVADYRKRLLCHEDLSSRHTTLRGNLKALKKEITKTKDDLEYLQGSG
QYIGEVLRPLNNERFIVQARSGKRWVVNCCNKVHKGKLTAGTRVALNINALTIMRCLPGE
VDPVVYNMLHEDPGYVSYSAVGGLSDQIRELRESIELPLMVPELFLRIGIKPPKGVLLYG
PPGTGKTLLARLIASNINVNFLKVVASAIIDKYIGEGARLIRKMFGYARAHQPCIIFIDE
IDAIAGHHLRESTCADREIQRTLMELLNQLDGFDQLGKVKVIMATNRPDVLDPALLRPGR
LDRKIEIPLPNEQSRIEILKIHAAGITKHGDIDYDGVAKLAEGFNAADLRNVCTEAGLSA
ICAERDYVVHEDFMKVKYFSWKNFYAADLRHILFLLYLEPLAHPKLLNIDFFQ
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacggcggaggggatgctgctagtcggcagaaggcggtggcggactaccggaag
aggctgctatgtcacgaggatctcagttccaggcatacgacgctgaggggaaatttaaaa
gccttaaagaaggagatcactaaaactaaagatgatctagagtatctccagggatcagga
caatatattggagaggttcttaggccacttaataatgagcgatttattgtacaggcaaga
agtggaaaaaggtgggttgttaactgctgcaacaaagtgcacaaagggaaactaacagca
ggaacacgggtggctcttaacataaatgctcttacaattatgcgctgtcttccaggagag
gttgatcctgttgtgtataacatgctgcatgaagatccaggatatgttagttactctgct
gtaggtgggctgtcagaccagataagggaactgagagagtcaattgagctgcctcttatg
gttcctgaactcttcctcagaataggaattaaacctccaaagggggttctcctctatggt
cctcctggtactggaaagacactactggcgagattaattgctagcaacataaatgtgaac
tttctaaaggttgtggcaagtgctataatagacaaatatataggtgaaggtgcacggctg
attaggaagatgtttggttatgcacgtgcccatcaaccttgcattattttcatcgatgag
attgatgccattgcggggcatcatttgagagagagtacctgtgctgatcgggagattcaa
cgaacactaatggaactgctcaatcaactggatggatttgatcaattagggaaggttaaa
gtgattatggcaacaaatcgaccagatgttctagatccggctctacttcgccctggcagg
ctagacagaaaaattgagattcctttaccaaatgaacaatcaaggatagaaattcttaaa
atacatgctgctgggataacaaagcatggtgatatcgactatgatggagttgcaaaactt
gcagagggttttaatgcagcagatcttaggaatgtatgcacagaagctggattgtcagct
atttgtgcagagcgcgactatgtggttcatgaagactttatgaaggtaaaatatttctca
tggaaaaatttctatgcagcagatcttaggcatattttgtttcttctgtacctggagcct
cttgcccatccaaaacttttgaacattgacttttttcagtaa
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