Zingiber officinale (ginger): 122041028
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Entry
122041028 CDS
T08725
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00531
Glycosaminoglycan degradation
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
122041028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
zof00536
]
122041028
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
122041028
Glycosaminoglycan binding proteins [BR:
zof00536
]
Heparan sulfate / Heparin
Enzymes
122041028
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
122041028
NCBI-ProteinID:
XP_042456492
LinkDB
All DBs
Position
2A:35772104..35775141
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AA seq
546 aa
AA seq
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MSRIGSGGDLPRLLGYCLFLCLAGHVGAHSGISDAEAGVYSNAVVIDGTAPIAVTDEDFI
CATLDWWPPEKCDYGTCSWGMASMLNLNLSSPILLNVIKAFSPLKLRLGGSLQDKVIYET
LDSKQPCTPFAYNASEMFSFTEGCLPLARWDELNEFFQKTGAIIIFGLNALNGRVKQSDG
SVGGPWNYTNAASLIRYTVNKGYTIFGWELGNELSGSGVGTKVDADQYSADVVNLKRIVD
DIYQGFPVKPLVLAPGGFFDAAWFADLVDKAKPNSLDVLTHHIYNLGPGVDKHLVEKILD
PTYLDGEASVFRDMQGLIRISGTKATSWVGEAGGAYNSGHHLVTDAFVFSFWYLDQLGMS
ATYDTKTYCRQSLVGGNYGLLNTTTFHPNPDYYSALLWHRLMGTRVLATNLIGREPSLIR
AYAHCAKESEGVTLLLINLSGNTTTQLPIISPTSYSLGRKHHPGAARSKIPSLSAEDTRE
EYHLTAKDGDLHSQTMLLNGNALELDADGNIPTLDPIKVDASRPIIIAPFSIIFAHIPSF
RPPACR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggattggtagtggtggtgatcttcctcggctgctggggtactgtctatttctg
tgcctcgcgggacatgtcggagcgcactccggcatatcggatgcagaagcaggggtatac
agcaatgctgttgttatcgacggtacagcccctatcgccgtgaccgatgaagatttcatc
tgcgctactctggactggtggccacctgagaaatgtgactatgggacatgcagctgggga
atggcatccatgctcaatctgaatctttccagtccgatcttgttgaatgttataaaagct
ttttcaccgctgaagcttcggctggggggctccttgcaagataaggtgatatatgagaca
ttagactctaagcagccatgcacgcccttcgcatacaacgcatcggagatgtttagtttc
actgaaggctgcttacctttggccagatgggatgaactaaacgagttcttccagaaaaca
ggggcgatcataatttttggcttgaatgctctaaatggaagggttaagcagagtgatggc
tcagttggaggaccttggaactacaccaacgctgcttctctcattcgttatacagtcaac
aagggttacacaattttcggttgggagctcggaaacgagttaagtggatcgggcgtggga
actaaagtcgacgcagatcagtattccgcagatgttgtcaacctcaaacggatcgtcgac
gacatctaccaaggcttcccagtaaaaccactggtgttagcaccagggggcttctttgac
gccgcctggttcgctgacctcgtcgacaaagcaaaacctaactcgttggatgtgctcact
caccacatttacaaccttggcccaggtgtggacaagcatttggttgagaaaattctggac
ccgacttatctggacggcgaggcgagcgtattcagagatatgcaagggcttatcaggatt
agtgggactaaagcgaccagttgggttggcgaagctggaggggcttacaacagtggccac
catcttgtgactgacgcattcgtcttcagcttctggtacctggaccaactcggcatgtcc
gccacctacgacaccaagacatactgccggcagtcgttggtgggtggaaactacggcctt
ctcaacacaaccaccttccatccaaatcctgactactacagcgctctattgtggcatcga
ttgatgggaacccgggttttggcgacaaatttaatcgggagagagcccagtttgatcaga
gcatatgctcactgcgcaaaagaatcagaaggagtcactctgctattgatcaatctcagt
ggcaacaccacgactcagcttccgatcataagcccgacttcttattcgctcggccggaag
catcatccgggggctgctagatcaaagattcctagtctgtcggcagaggacacaagggaa
gagtaccacctcacagccaaggacggtgacctccacagccagacaatgctgctgaatggc
aatgcgttggaattagatgctgacgggaatattccgacgttggatcctattaaagttgac
gcatcgcggccgatcataatcgctccgttctctatcatattcgcgcacattccttctttt
cgacctcctgcatgtaggtag
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