Zingiber officinale (ginger): 122041063
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Entry
122041063 CDS
T08725
Name
(RefSeq) DNA polymerase epsilon subunit 3-like isoform X1
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03030
DNA replication
zof03082
ATP-dependent chromatin remodeling
zof03410
Base excision repair
zof03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122041063
03410 Base excision repair
122041063
03420 Nucleotide excision repair
122041063
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122041063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zof03032
]
122041063
03036 Chromosome and associated proteins [BR:
zof03036
]
122041063
03400 DNA repair and recombination proteins [BR:
zof03400
]
122041063
Enzymes [BR:
zof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122041063
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
122041063
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
122041063
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
122041063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
TrmB
Bromo_TP
AIM24
Terminase_2
TAF
Motif
Other DBs
NCBI-GeneID:
122041063
NCBI-ProteinID:
XP_042456541
LinkDB
All DBs
Position
2A:complement(42497055..42510448)
Genome browser
AA seq
180 aa
AA seq
DB search
MRPEILQRITIELKINYIWRSRRTGGEGMAEERTLGKSGELTETAPGKALTVEVEELPKA
IVRRVVKDKLSKLSSGGGEEEILVNKDALLAFSESTRIFIHYLSATANDICKESKRQTIN
ADDVLKALEEIGFVEFVEPLKASLEEFRKRNEVKRSGVKGKETAKKRKIEDTPSKNGRKE
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcggccggaaatcctgcaaagaattaccattgagctgaagatcaattatatttggaga
agcaggcgaactggaggggaggggatggcggaggaaagaacacttgggaagagcggggag
cttacggagacggcgccgggaaaggcactcaccgtggaggtcgaggagctccctaaagct
atcgtgcgccgggttgtgaaagataaactttccaagttgtcttcgggaggaggggaagag
gagatattggtaaacaaagatgcactgttggccttctctgagagcactcgcatcttcatc
cattacctctccgccacggcaaatgatatctgcaaggaatcaaagaggcaaacaatcaat
gctgatgatgtcctgaaggcgcttgaggagattggctttgttgaatttgttgagccttta
aaagcttctttagaggagtttagaaaaaggaatgaagtcaaaaggtctggagtaaaagga
aaagagactgctaagaagcggaaaatagaagacacacccagcaagaatggtagaaaagag
taa
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integrated database retrieval system
