Zingiber officinale (ginger): 122041185
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Entry
122041185 CDS
T08725
Name
(RefSeq) high mobility group B protein 6-like
KO
K09273
upstream-binding transcription factor
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122041185
03021 Transcription machinery [BR:
zof03021
]
122041185
Transcription factors [BR:
zof03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
122041185
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
122041185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
122041185
NCBI-ProteinID:
XP_042456726
LinkDB
All DBs
Position
2A:complement(72668145..72670733)
Genome browser
AA seq
490 aa
AA seq
DB search
MAMSVQKKGRSRKALKDLLPSEVNISDSSSLVCDLSKDDGEGLSPRVSRKNSRKGPAKSK
PSLSEAEKSFADELLQLQGRLQQLQLEKEKTEGLLKQRDEMLKQKDEEIENRDKEHEKLQ
EELMKTQKLKEFKPTMNFPLVKSLREKDQDKNDKKKSKGKIGDQKRKPCPAYVSWCKDQW
NDVKKENLDADFKEISNVLGTKWKALSADEKKPYTDRYQKEKEAYQEVVKQEKREKEAMK
LLEEEQMQKTAMELLEQYLQFQQEVEKEGKKARKEKDPLKPKHPMSAFFLFSKERREALL
QEKKTILEISKIAGEEWKNMAEEQKAPYEEIAKTLKENYNQEIKLYKQKKIEEATTLEKE
EEEHIKVRMQEALQLLKKKEKTDNMIKETKENRNRKKKAKEEQIADPNRPKRPPSSFLLF
SKEARKQVMEERPGIPNNTLNAMISVKWKEMNEGEKKIWNDKAAEGLCAYKKEVEEYNKA
LMENKTTPKE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtcggttcaaaagaagggcaggagccggaaggctctgaaggacttgctgccg
agcgaggtcaacatctccgattcatcctcactggtgtgtgatcttagcaaggacgatggc
gaaggcctctctccccgtgtctcgcgcaagaattccaggaaagggcctgcgaagtccaag
ccttctttgtcggaggccgagaagtccttcgcggacgagttgctccagctgcagggaaga
ctccagcagctccaactcgagaaagagaagacagaagggctcctgaagcaacgcgacgag
atgctgaagcagaaggatgaggagatcgagaaccgagacaaggaacacgagaagctgcag
gaggagctcatgaagacccagaagctgaaagagttcaaacccacaatgaactttcctctt
gttaaatctctaagagagaaagatcaagataagaatgataagaagaagagcaaaggaaaa
attggtgaccagaagaggaaaccatgcccggcatacgtctcgtggtgcaaagatcagtgg
aacgacgtgaaaaaagagaaccttgatgctgattttaaagagatttccaatgtgcttgga
acaaaatggaaggcgttgagcgcagatgagaagaagccctacacagacaggtaccagaag
gagaaggaggcctaccaggaagtcgtcaagcaagagaagcgagagaaagaagcaatgaag
ctactggaagaagagcagatgcagaagaccgccatggagttgctggaacaatatttgcag
tttcaacaggaagttgaaaaagagggcaagaaagcaaggaaagagaaggatcctttgaag
ccaaaacatccgatgtcagctttcttcttgttctcgaaagaacgccgtgaagctctgcta
caagagaagaaaaccatccttgagatctcaaagatagcaggagaggagtggaagaacatg
gcagaagagcagaaagctccctatgaggagattgctaagactctgaaggaaaattacaac
caagagattaaactttataagcaaaagaagattgaggaagctactactttagagaaggaa
gaggaggagcacatcaaagtccggatgcaagaagccctccagctgcttaagaagaaggag
aaaacagataacatgatcaaggaaactaaggagaatcgtaacaggaagaagaaagctaag
gaagaacaaattgcagatcccaataggccaaagaggccaccctcttctttccttctcttt
agcaaggaagcaaggaaacaagtcatggaggaaagaccaggcattccaaataataccttg
aatgctatgatttcagtgaaatggaaggaaatgaatgaaggggagaagaagatttggaat
gacaaggcagcagaaggcctttgtgcgtacaaaaaagaagtagaagaatacaacaaggct
ttaatggaaaacaagactactcctaaagagtga
DBGET
integrated database retrieval system
