Zingiber officinale (ginger): 122041219
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Entry
122041219 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122041219 isoform X1
KO
K17925
sorting nexin-13
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zof04990
]
122041219
Domain-containing proteins not elsewhere classified [BR:
zof04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122041219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
122041219
NCBI-ProteinID:
XP_042456766
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All DBs
Position
2A:complement(74890703..74908057)
Genome browser
AA seq
1016 aa
AA seq
DB search
MRPMETLQDLIEEAKVRTVCWGICIFAISYFLTHTSKSMWTNIPLSFLILAALRFLSYEV
ELRWRVRPIPKPTYLSHLEKKQLQLDDSHLSTVVTPSRWKKKIDSPLIDSAIDEFISKIL
QDFVIDLWYSSITPDKEAPELIRSLILDVLGEISGRLKEMNLVDLLTRDLVDLIGNQLDL
YRKKQSEIGVNVMITLSSEERDEKLKHHLMASNELHPALFSPESEYKVIQRIIGGVLAIS
LNPQEAQCPLVSCFSRELLTCLVVQPILKFASPGYINELIEYMFLNNTDSSNMVVKSDSS
NKDSGQNTQDGKSESRKTSTNFSSHSALVHSGAEKSTEVSLQGTQKNSVHHLPSRPADWA
VALEATTKRRTEVLAPENLDNMWTKGRNYQKKTANLIKAGALLGSVNATSGLVTPTPQAG
SPGKELVANMSDSIKGIDENYMVHLMHGIAKNECHISYDPEKKQCMEMSLSCQNEKNTGK
LVTSNKIQLKRSSSTSDMDTNFLNRKGESTSSKENNRQDSAKLTDEESARVVPHMEGYPH
TPKIKCRVVGAYFEKIGSKSFAVYSIAVTDTDGKTWFVKRRYRNFERLHRQLKDIPNYSL
HLPPKRFLSSSIDDYFVHQRCILLDKYLQDLLSIANVAERHEVWDFLSVSSKNYSYGKSS
SVMKNLAVNVDDAMDDIVRQFKGVSDGLMRKVVGPPSSYVVSPSLDDKSLSLTWSQEDMS
KQIPRFRSMETSHSLSEDEGHDDDTVTNSGWHSDNELSSKSFPPRVVKRTKVHSSIEYQQ
GQGSEKFDRIGSDTSKTLLPANSFEDPVGMPSEWTPPNVSVPILNLVDKIFQLNRRGWLR
RQAYWMSKQILQLIMEDAIDDWILRQIHWLRRDDVIAQGIRWVQDILWPNGTFIIKLGSR
QEVDDFELDQKPSQGKSKMSGGKANSSSSFQAQLEAARRADYIKKMLLGGAPTALVSLIG
SNQYRRCARDIYYFLQSTVCIKQLAYTIFEMVIVSVFPELRELLIDIHETARKQSF
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagacccatggagactctgcaagatctgatcgaggaggccaaggttcgcaccgtctgc
tggggcatctgcatcttcgccatctcctacttcttgacccacactagcaaatctatgtgg
acaaatatccccttatcttttctcattctagcagcattacgttttctctcatatgaggtt
gagctccgttggagggtgcggccaattcctaagccaacatatttatctcatttggaaaag
aagcagttacaacttgatgattctcatctttctaccgtagttaccccttcaagatggaag
aagaaaattgattcacctcttattgatagtgccattgatgagtttattagcaaaattcta
caggattttgtcatagatctctggtattcatctataactcctgataaagaggctccggag
ttaatacgctctttaatccttgatgttctaggtgaaatatctggaagacttaaagagatg
aaccttgtcgacttgttaactagggatcttgttgacttaatagggaaccaactcgatctc
tacaggaaaaaacagtctgagataggtgtgaatgttatgataactctttcttcagaggaa
agggatgaaaagttaaagcaccatctaatggcgtccaatgaacttcaccctgctttattt
tcaccagagagtgaatacaaggtaattcaacgcattattggaggagttttagctatatcc
ttgaatccacaagaagctcaatgtccattggtctcttgtttcagtcgggagttgttgacc
tgtttggtcgtgcaacctattttgaagtttgccagccctgggtatatcaatgaattaatt
gaatacatgtttcttaacaatactgatagcagtaatatggtggtcaaatctgatagttcg
aataaggattcaggacagaatactcaagatggtaaatcagagtcaaggaaaacgtcaacc
aacttctcctctcactcggcattagttcacagtggcgctgaaaaatcaacagaggtttct
cttcagggtacccaaaaaaattctgtccatcatttaccatctcgtcctgcagattgggcc
gtggcactggaggctactacaaagaggagaactgaagttcttgcacctgagaatctagat
aacatgtggactaaaggcagaaactatcaaaagaaaaccgccaacctaataaaagcaggg
gcattactgggatctgtaaatgctacttcaggattggtaactcctactccccaagcagga
agtccagggaaagaattagtggccaacatgagtgatagtatcaaaggtatagacgagaac
tatatggttcacttaatgcatggaatagcaaaaaatgagtgtcatatttcctatgatcca
gagaagaagcaatgcatggagatgtccctcagttgtcagaatgagaaaaatactggcaaa
ttggttactagtaataagattcaacttaaacggtcaagcagtacatctgatatggataca
aattttctaaacagaaaaggtgagagtactagttccaaggagaacaatcggcaagatagt
gctaaacttacagatgaggaaagtgctagagtggttccccacatggaaggatacccgcat
actcctaaaatcaaatgccgggttgttggggcatattttgaaaagattggttcaaaatcc
tttgcagtttattcaattgctgtaactgatactgatggcaagacatggtttgtgaagaga
agatatcgtaattttgagcggctgcaccgccaactcaaggatatacctaattattcatta
catttacctccaaaacggtttctttcatccagtattgatgattattttgtgcaccaacgt
tgcatccttcttgacaaatatttgcaagatctactttcaattgctaatgttgcggagcga
catgaagtttgggattttttaagtgtttcttccaagaattactcttatggaaaatcttca
tcagtgatgaaaaatttggcagtcaatgtggacgatgcaatggatgatatagttcgccag
ttcaaaggggtttctgatggtctcatgcgaaaagttgtcggcccaccgtcatcttatgta
gtttctccctcactagatgacaagagcttgtcattgacctggagtcaagaagacatgagc
aagcaaatccctagatttagaagtatggaaacatcacatagcttgtctgaggacgaggga
catgatgatgatactgtaacaaatagtggatggcattcagataacgaattgagctccaaa
agctttcctcctcgtgttgtcaagcgcacaaaagttcattcaagtatagaatatcagcag
ggccaaggctcagagaagtttgacaggattggctcagatacttcgaaaaccttactacct
gccaattcttttgaagatccagttggaatgccatctgagtggacaccaccaaatgttagt
gtgccgatattgaatttggttgacaaaatatttcagctaaatagaagaggttggctaagg
agacaagcgtactggatgtcaaaacaaattttgcaattgataatggaagatgcaattgat
gattggattttgagacaaatccattggctaaggagggatgatgttattgctcaaggaatt
cgatgggttcaagatattctctggcctaatggtacattcataatcaagttggggagcaga
caagaggtggatgattttgagcttgatcagaaaccttctcagggtaaaagtaagatgagt
ggtggtaaggccaatagctcaagctcttttcaggcccagcttgaggcagctcgcagggct
gattatattaagaaaatgctacttggtggagctccaactgcattggtcagcttgatcgga
tcaaaccaatatcgacggtgtgctagggatatctactattttctgcagtccaccgtatgc
attaagcagctcgcgtacactatctttgaaatggtaatcgtttcagtctttccagaatta
cgcgaactgctgattgatatacacgagactgcacgcaagcagtccttttga
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