Zingiber officinale (ginger): 122041260
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Entry
122041260 CDS
T08725
Name
(RefSeq) AUGMIN subunit 6-like
KO
K16589
HAUS augmin-like complex subunit 6
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122041260
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Augmin complex
122041260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAUS6_N
DUF3450
ATG17_like
SlyX
DUF6869
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
122041260
NCBI-ProteinID:
XP_042456828
LinkDB
All DBs
Position
2A:77375130..77392338
Genome browser
AA seq
683 aa
AA seq
DB search
MATDREKEREAELESAMYTNCLLLGLDPAVIGGGGSGGSGGASRVGRFRHSNPRLGEQLL
YFLLSALRGPVQSAKDFDKVWPIFDSTQSREFRKIVQGIISDLESQGALPRSSSRVSSLA
TCCGPRFVELLWQLSVHALREVHKRTFTADVASDPLPPSLTDASYLNAAALLPVTKARIA
LERRKFLENANKSVHRQAAWSDLAHEMTAEFRSLCAEEAYLQQELEKLQDTRNKAKLEGE
LCDDRISSSSQTPHLVSKATRLWESLLARQSQHEVLASGPIEDLIAHREHRYRISGSSLL
AAMDLSSNLPHSDVLSVHDLEASSALVTQGKKDSYQIQEQSDALPKMDDRSGRVHPTVDV
AEVLRRWTHALQRIHKQSLNLVKANDGEGPDILYNASDGCSGGHAESLAATLAEHRQHLV
SIQGLIDQLNEAIPTMQQSISELTEEVNNISTSVDGFGAHSTTIPSESIGRPLESIGDDV
ADITSKLSSTHLEKCSNSPTLKLPHLFNVTPNSSAKGTHATKRRTATLPVHQQSVPAQKA
ATTKHPSDTDGESKESADKYAQNIRRSVREAALSSLSSKSVFQDRSNDDGSEHFFISLPT
DDCSTNQIKQQFISSTPESQTLQGKLNWHKECTNNCSLSDTSQDGTLDQVFSPPLLLESP
FYQDAYEDLLAPLSETDAALMEH
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatcgagagaaggagagggaggcggagctcgagagtgcaatgtacaccaac
tgccttctcctaggcctcgaccccgcggttatcggcggcggcggcagcggcggcagcggc
ggcgcctcccgggtcggacgcttccgtcactccaaccctaggctgggggagcagcttcta
tactttcttctctccgcacttcgcggccccgttcagtccgccaaggatttcgataaggtt
tggccgatcttcgattccactcagtcccgtgaatttcgaaagatagtacaagggataata
agcgacttagagtcgcaaggagctctgccgcggagtagttctagggtctcgtctcttgca
acatgttgcggaccgagatttgttgagcttttatggcaactatctgttcatgctttacga
gaggttcacaagagaacatttacggctgatgtggcttctgaccctttaccaccgtcactg
actgatgcttcatatctgaatgctgctgcactacttcctgtgaccaaggctaggatagct
ctagaaaggaggaaattccttgaaaatgccaacaaatctgttcataggcaagctgcatgg
tctgacttagctcatgagatgactgctgaatttcgtagtctatgtgccgaggaggcctac
ttgcaacaagagttagaaaagcttcaagatacgagaaataaagctaagttggaaggggaa
ttgtgtgatgatagaatctccagctctagtcagacccctcatttggtctccaaggctacc
cgactttgggaatcattgttagctcggcagagccaacatgaagtcctagcttctggtcca
attgaggatctcatagctcatcgagagcataggtaccgcatctctggatcatctttgctt
gcagccatggatctaagttcaaatctcccacattctgatgtactatcagttcatgatctt
gaggcatcttctgcattagttactcaagggaaaaaggactcgtatcaaatacaagagcag
agtgatgctcttcctaagatggatgatagaagcggaagagttcatcctacagttgatgta
gctgaagttctaaggcgttggactcatgctctacaacgtatacacaagcagtcacttaat
ttggtgaaagctaatgatggggagggtcctgatatactttataatgcttccgatggctgt
agcggtgggcatgcagagtcattagctgctactcttgcagaacatcggcagcatttggtt
agcatacagggactcattgatcagctaaatgaagcaattccgacgatgcagcagtcaatt
tctgagctcacggaagaagtaaataatatttctacatcagtagatggatttggtgcacat
tcaaccactatcccaagcgaaagtatcggcagacccctagaaagcatcggtgatgacgtt
gctgacatcacttcaaaactctcctctacccaccttgaaaaatgttcaaatagtcctact
ctgaaacttcctcatttgttcaacgtaactccaaattcatcagcaaagggtacccacgcg
accaaacgccgtactgcaacacttccagtgcaccaacaaagtgtgccagctcagaaggca
gctacaactaaacatccaagtgatacagacggggaatcaaaagagagtgctgataaatat
gcccagaacattagacgttctgtacgtgaagctgctctatcaagcttgtcgagcaaatca
gtgttccaagatcgaagtaatgatgatggctcggagcacttctttatttctctaccaacg
gatgattgttcaactaatcagataaaacaacaattcatttcttctacaccagaatctcaa
actttgcagggcaagttaaattggcacaaagagtgcacgaacaactgtagcctatcagat
acatcccaagatggcaccttggatcaagttttctcacctccattgctactggaatcgccc
ttctaccaggatgcctatgaggatttgctcgcaccattgtctgaaaccgatgctgctctc
atggagcattag
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