Zingiber officinale (ginger): 122041261
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Entry
122041261 CDS
T08725
Name
(RefSeq) elongator complex protein 3-like
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122041261
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
122041261
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
122041261
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GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
122041261
NCBI-ProteinID:
XP_042456829
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Position
2A:77390967..77396472
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AA seq
561 aa
AA seq
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MATPETRKKPTPGRGGVSIPLGISEDEARVRAIAEIVSAMAERSRRGENVNLNELKSATC
RKYGLSRAPKLVEMIAAVPEADRDALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTG
NICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVE
FILMGGTFMSLPTDYRDYFIRNLHDALSGHTSANVEEAVQYSEHGTTKCIGMTIETRPDY
CLGPHLRQMLLYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMM
PDLPNVGVERDLESFREFFESPAFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPELLV
DVIARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREA
GIQDIHHKVKPEEVELVRRDYAANEGWETFLSYEDTRQDILVGLLRLRKIGRNATCPELT
GRCSMVRELHVYGTAVPVHGRDANKLQHQGYGTLLMEEAERIARREHRSAKVAVISGVGT
RHYYRKLGYELEGPYMVKYLT
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggccacgccggagacgcgcaagaagccgacgcccggccgaggcggagtctccatcccg
ctgggtatctccgaggacgaagcgcgtgtccgcgccatcgctgagatcgtctccgccatg
gccgagcgctcccgccgaggggagaacgtcaatctcaacgagctcaagtccgctacttgc
cggaagtacggcctctcccgcgcgccgaagctcgtggagatgatcgccgcagtccccgag
gcggaccgcgacgccctcctcccgaagcttcgtgccaagcccgtccgcaccgcgtccggc
atcgcggtggtcgccgtcatgtcgaagccgcaccggtgccctcatattgctaccaccggt
aatatatgtgtatactgccctggtggccctgattcggattttgagtacagcacgcaatca
tataccggttatgagccaacaagcatgagagccatccgagccagatacaatccatatgta
caagctagaagcagaatagaccaactgaaaaggctaggtcacagtgtggataaggtggag
ttcattttaatgggagggactttcatgtcactgcctaccgactatcgtgattacttcata
agaaatcttcatgatgctttatcaggacatacatctgcaaatgttgaagaggctgtacag
tactcagagcacggcacaacaaaatgtattggaatgacaatcgaaacgagacctgattat
tgtttaggaccccatctacgccaaatgttgttatatggttgtacacgtcttgagatagga
gtacaaagcacatatgaagatgtagctcgtgacacaaatagaggtcacacagttgctgct
gtagctgactgcttttgcttggctaaggatgccggttttaaggttgttgctcacatgatg
cctgatcttccaaatgttggagttgagagagatttagaaagttttagagaattttttgag
agcccggcattcagggcagatggtcttaaaatctatccaacgctcgtaattagaggaact
ggactttatgagctgtggaaaaccggcaggtataggaattatccaccagagctcctggtg
gacgttattgcaaggattctatcgatggtaccaccatggacacgtgtttaccgagttcaa
agagatattcctatgccacttgtcacctccggagttgaaaaaggaaatcttcgtgaactt
gcattggcacgaatggaagatttaggattgaaatgccgagatgttagaacacgtgaggct
ggaatacaggacattcaccacaaagttaagcctgaggaagttgagcttgtgcgacgtgat
tatgcagcaaatgagggttgggaaacctttctttcatatgaagatacacggcaggacatt
cttgttggcttgttgcgtttgcgtaaaattggacgtaatgcaacatgccctgaacttacc
gggaggtgctccatggtccgtgaacttcatgtctatggaactgcagttcctgtacatggg
cgcgatgctaacaagctgcagcaccagggctatgggacactcctgatggaagaagctgag
aggatcgcccgaagggagcatcggtcagcaaaggtagctgtaatttctggtgtcggaaca
cgtcattattaccggaaattggggtacgaactagaaggtccttacatggtaaagtatcta
acataa
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