Zingiber officinale (ginger): 122041557
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Entry
122041557 CDS
T08725
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122041557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122041557
03012 Translation factors [BR:
zof03012
]
122041557
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122041557
Translation factors [BR:
zof03012
]
Eukaryotic type
Release factors
122041557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
EF-G_D2
Gtr1_RagA
TniB
Motif
Other DBs
NCBI-GeneID:
122041557
NCBI-ProteinID:
XP_042457213
LinkDB
All DBs
Position
2A:complement(93486889..93498433)
Genome browser
AA seq
531 aa
AA seq
DB search
MEDERTLATVTHPSGLPDDWSKEDEEMIEEEHPPKAAGNSHDSPPQDLKEEVTSQLKSLQ
LEARVKEKESIANDLMEEIEELDEEEDKKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDD
RTIQKYEREAKDKSRESWYMAYIMDTNEEERIKGITVEVGRAHFETESTRFTILDAPGHK
SYVPNMISGASQADIGVLVISARKGEFETGFEKGGQTREHVLLAKTLGVVKLIVVVNKMD
DSTVKWSKERFDEIESKIVPFLRSSGYNVKKDVQFLPISGLMGSNMKTRLDKSICDWWDG
PCLFEVFNSIEVPPRDPNGPFRMPIIDKYKDMGVVVMGKVESGGIHEGDSLLVMPNKANV
KVLAIFCDENKVKRAGPGENIRVRLSGVEEEDILSGFVLTSVANPVGAVNEFKAQLQILE
LLDNAIFTAGYKAVLHIHAVVEECEIVELIEEIDTRKKKETDARKKRSKHKPLFVKNGAV
VVCRIQVNNLICIEKFSDFAQLGRFTLRTEGKTVAVGKVVELPPAGNATFV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaacggactctggcgaccgtaacccatccgagcggtctgcctgacgactgg
agcaaagaggacgaagagatgatcgaggaggagcatcctccgaaagctgctggcaactcc
cacgattcgccaccccaagatctgaaagaagaggtaacttcacaactaaagtcattgcaa
ctggaagcaagagtgaaggaaaaggagtcaattgcaaatgatttaatggaagagattgag
gagctcgatgaggaggaagacaagaagcgacacttgaatgtagttttcattggccatgtt
gacgctgggaaatctacaattggagggcagatactttttcttagtggtcaggttgatgac
cgaacaattcagaaatatgaaagggaagctaaggacaaaagtcgagaaagctggtacatg
gcctatatcatggacacaaatgaggaagaacggatcaagggaataactgttgaagttggg
agagctcattttgaaaccgaaagtacaagattcacaattttagatgcaccgggtcacaag
agttatgtacctaacatgatcagtggtgcatctcaagctgatataggtgtccttgttata
tctgctcgcaagggggagtttgaaacaggatttgagaaaggtggacaaacacgtgaacat
gtcttgcttgctaaaacattgggtgtagttaagttaattgttgttgtcaacaaaatggat
gattctactgtgaaatggtcaaaagaaaggtttgatgaaatagaatctaagatagttccc
tttttgcggtcttctggctacaatgtaaaaaaagatgtccaattccttcctatttctggt
ttgatgggtagtaacatgaagacaagattagacaaaagcatttgtgattggtgggatggc
ccatgcttatttgaggtttttaattctattgaagttccaccacgtgatcctaatggtccc
ttcaggatgccaattattgataaatacaaggacatgggagtagtggtcatggggaaagtg
gaatctggaggcatccacgaaggtgatagtttgttggtcatgcctaacaaggctaatgtc
aaagttcttgcaatattttgtgacgaaaataaagtcaagcgcgctggccctggtgagaat
attagagtaagattgtctggggttgaagaagaagatatactttctggttttgtactcaca
agtgttgcaaatccagtaggtgcagttaatgaatttaaagctcagttacagattcttgag
ttgctggataatgccatttttactgctggatacaaggctgtcttacacatccatgctgtt
gtcgaggaatgtgaaattgttgaactaattgaagaaatcgacacaagaaagaagaaagaa
actgatgctaggaagaagaggtcaaaacacaagcctctttttgttaagaatggtgctgtt
gttgtttgccgcattcaggtgaataacttaatttgcatcgaaaaattttctgattttgcc
cagctaggaaggttcacacttagaactgaaggtaaaactgtagctgtagggaaagtggtt
gaacttccaccagcaggaaatgctacatttgtgtaa
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