Zingiber officinale (ginger): 122041579
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Entry
122041579 CDS
T08725
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122041579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122041579
03012 Translation factors [BR:
zof03012
]
122041579
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122041579
Translation factors [BR:
zof03012
]
Eukaryotic type
Release factors
122041579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
BMT5-like
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
122041579
NCBI-ProteinID:
XP_042457244
LinkDB
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Position
2A:94266996..94271096
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AA seq
437 aa
AA seq
DB search
MADDQETDKNIQIWKIKKLIKALESARGNGTSMISLIMPPRDQIARVTKMLADEYGTASN
IKSRVNRQSVLAAITSAQQRLKLYSKVPPKGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN
VSLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDQRLQVKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLIVWENLDINRYVLKNSATGEIIIKHLNKDQEADQSNFRD
LASNAELEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RSLDELSDDGEVYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgatcaggaaaccgataagaacattcagatctggaagatcaagaaactaatc
aaggcattggaatctgccagaggtaacggcacaagcatgatctctctcataatgcctcca
cgtgatcaaattgctcgagtcaccaagatgctggctgatgaatatggtactgcttcaaat
attaaaagtagagtcaatcgacagtccgtgctggcggccattacatcggctcagcagagg
ctgaaattgtacagcaaggttcctcccaagggtctggttttgtataccggtaccattgtc
accgatgacggaaaggaaaagaaggtgacgattgatttcgagccttttaaacccattaac
gtctcgctctacctttgtgataacaagttccataccgaagctttgaatgaactcctggaa
tcagatgacaaatttggtttcatagttatggatggtaatggaactctgttcggtaccttg
agtggaaatacacgagaggtgcttcacaaattcactgttgaccttccgaaaaagcatggc
cgcggagggcaatcagcacttcggtttgctaggctccgtatggaaaagcgtcacaattat
gtgcgaaaaacagcagaactcgccacccagttcttcataaacccagctacgagtcagcca
aatgtggccggactgatcttggccggttcagccgacttcaaaaccgagttaagtcaatca
gacatgttcgatcaacgtcttcaagttaaaatcctcaatgtagtcgatgtttcttacgga
ggagaaaacggtttcaaccaggccattgagttgtcagcagagattctgtcgaatgtgaaa
ttcatacaggaaaagaagttgatagggaagtatttcgaagaaataagtcaggacactggg
aaatatgttttcggtgtggacgacactttaaaggctcttgaaatgggagctgtggagacc
ttgatcgtgtgggaaaatttggatatcaatcgatacgtgctaaagaacagtgctactggg
gaaattataataaagcacctgaacaaggatcaagaagccgaccaaagcaacttccgcgac
ctggctagcaacgcggaactagaggtccaggagaaaatgtcgcttctagagtggttcgcc
aacgaatacaagcgtttcggttgcacattggagttcgtcaccaacaaatcgcaagagggc
tcgcagttctgcaggggcttcggtggcataggtggcatcctgcgctatcagctggacatg
aggtccctcgacgagttgtcggatgacggagaggtgtatgaggactccgactag
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