Zingiber officinale (ginger): 122041640
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Entry
122041640 CDS
T08725
Name
(RefSeq) transport inhibitor response 1-like protein Os04g0395600
KO
K27740
protein auxin signaling F-box 2/3
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122041640
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
122041640
NCBI-ProteinID:
XP_042457325
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Position
2A:complement(96589927..96593686)
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AA seq
575 aa
AA seq
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MTYFPDEVVEHIFDFLSSHRDRNNVSTVCKAWYLVERLSRRCVFVGNCYVLRPERVMARF
PRMKCLTVKGKPHFADFNLVPHDWGGYALPWIEAAARCCPGLDELRLKRMVVSDDSLEVL
ARSFPNFKALVLISCEGFSTDGLAAIATHCRGLRELDLQENEVEDHGRQWLSCFPDSCTS
LVSLNFACLKGEVNTSALERLVARCQNLRCLKLNRAISIESLIRILAQAPSLVELGTGSF
TADHLTEAYQNLINAFYRCKSIRNLSGFWDASPRCLQSIYSICSNLTVLNLSYAPAIQCN
DLIKMIRHCFKLQKLWVLDCIGDKGLAVVASACKELQELRVFPSDISGTGIAAVTEEGLV
AISSGCPKLNSLLYFCHQMTNAALITIANNCPHFTRFRLCILDPRKPDPITNHPLDEGFG
AVVKSCKDLKRLSLSGLLTDKVFLYIGMYAARLEMLSIAFAGDSDKGMVYVLNGCKNLKK
LEIRDSPFGDAALLENVGKYETMRSLWMSSCDVTLGGCRALATKMPRLNVEVINEMDEND
EMVENPSDMHRVEKMYVYRSLTGPRNDAPEFVWIF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgacttacttcccggatgaggtggtggagcacatctttgacttcctgagctcccaccga
gaccgtaataatgtgtcgacagtgtgcaaggcatggtatttggtggagaggctcagccgc
cggtgtgtattcgtcggcaactgctacgtcttgcggcctgaacgagtaatggccaggttc
cctagaatgaagtgcctcactgtcaaggggaagccccattttgctgatttcaatctggtt
ccccacgattggggaggctatgcgctaccgtggattgaggcggctgcccgatgttgccct
ggtttggatgagctccgactgaagaggatggtggtgtcggacgacagccttgaggttcta
gcccgctctttccccaactttaaggcccttgttctaattagctgcgagggtttcagcact
gatggacttgctgcgattgctactcactgcaggggtcttagggagctagatttacaggaa
aatgaagtggaagatcatggtcggcagtggctgagttgcttccctgattcctgtacttca
ttggtatctctaaattttgcatgtctaaaaggagaggtgaatacaagtgctcttgagcga
cttgttgctaggtgccagaatctaaggtgcttgaagcttaatcgagcaatatctattgag
tcacttatcaggatacttgcccaagcccccagtttggtggaacttggaaccggctcattc
acagctgaccacctcactgaagcttaccagaatctaattaatgccttctacagatgcaaa
tctataaggaatttgtcaggtttctgggatgcttctcctcgctgtttgcagtccatatat
tccatctgttcaaaccttactgttcttaacttaagctatgcccctgcgatccagtgtaat
gatctaataaagatgattcgtcactgtttcaaacttcaaaaactttgggtattagattgc
ataggagacaaaggattagcagttgtggcctctgcctgtaaagagttacaggagttgagg
gtatttccgtctgatatctctggtactggcattgctgctgtgactgaagaaggccttgtt
gctatatcttcaggctgcccaaagttgaattctttactgtatttctgccaccagatgaca
aatgctgcactgatcactattgcaaacaactgtccccatttcacacggttcaggctgtgt
attcttgatcccagaaagccagatcccatcactaatcatccattggatgaaggttttgga
gcagttgtgaagtcgtgcaaagatctgaagagattatcattatcaggccttctaactgac
aaggttttcttgtatataggcatgtatgctgcacgtctagagatgctttcaattgcattt
gctggagatagtgataaaggaatggtttacgtgctcaatggatgcaagaatcttaaaaag
cttgaaataagagatagtccttttggtgatgcggcacttttggagaatgtagggaagtat
gaaacaatgcgatccctttggatgtcatcttgtgatgttactctagggggttgcagggca
cttgccacaaagatgccaagattgaatgttgaagttataaacgagatggatgaaaatgat
gagatggtggaaaatcccagtgacatgcatagggtggagaagatgtatgtttatcgaagt
ctgaccgggccaaggaacgatgcaccagaatttgtctggatattttag
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