Zingiber officinale (ginger): 122041896
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Entry
122041896 CDS
T08725
Name
(RefSeq) poly(ADP-ribose) glycohydrolase 1-like
KO
K07759
poly(ADP-ribose) glycohydrolase [EC:
3.2.1.143
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122041896
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.143 poly(ADP-ribose) glycohydrolase
122041896
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GFIT
Motif
Pfam:
PARG_cat_C
PARG_cat_N
Motif
Other DBs
NCBI-GeneID:
122041896
NCBI-ProteinID:
XP_042457691
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Position
2A:108699265..108719396
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AA seq
513 aa
AA seq
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METRGDLASILPFLPLVLRSSSLCWPSGALGSLKALALGSDVSRIRSGEVLFDAILDLRE
SLGLSSQPLAYGSASGFSSFFDELMSKEDSRVWFDNVVPEMARLLLQLPSLLESHYLKSD
ELFSEGKSGIRIMGPQEPGRVFLSQELIAALLSCAMFCLFPTSDRGFRGLPIINFDNLFA
PLYWNEKQHQVQKVKCIIHYFERITSKMLTGSVSFERKVLHVDNSDHGLAYSSTTYWRSS
TTPLCPFGVFSEGLIEDQPYEAIEVDFANEYFGGGALGQGCVQEEIRFMINPELIVGMLF
LPSMNANEAIEIVGVERFSSYSGYGHSFQFMGDYQDNKPYDSMGRRKTWIVAIDALSNPR
MRQYGIEYLVRETNKALCGFFDQSKYKCRIEDIGSSESKGNPEGTSVSESSQVRNFQGSR
GIATGNWGCGAFGGDPEIKSMIQWLAASEGLRPFIHYYSFGEAALQKLEEATRWILQHGW
TVSDLWSMLAEYCDQRLSSKTFNGFFDWLLPCN
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggagacgaggggcgatctcgcctccatcctcccgttcctccctttggttctccgctcc
tcttccctatgctggccctccggggccctcggatcgctcaaagctctcgccttgggctcc
gacgtcagtcgcatccgctccggcgaggtcctttttgacgccattctcgacctgagggaa
tccctcggcctctcatcccaacccttggcctacggatctgcctctggattctcctccttc
ttcgatgagctgatgtcaaaggaagattcgagggtatggttcgacaatgttgttcctgag
atggctagattgctgctgcagctaccttctctcttggagtcgcattatctgaaatccgat
gagctgttttctgaagggaagtctggcatccgcatcatgggtcctcaggaaccgggcaga
gtgtttcttagtcaggaactgatagctgctcttctatcatgtgcaatgttttgtttattt
cccaccagtgatagaggctttagaggtcttccgatcatcaactttgacaacttgtttgcg
cctctctattggaatgagaagcagcaccaagtacagaaagttaaatgcatcattcactat
ttcgaaaggataacctcaaaaatgctaactggatctgtttcctttgaacgaaaagttctg
catgttgacaattctgaccatggtttagcatattcatcaactacttactggaggtcatct
actacgcctttatgcccctttggggtcttttctgaaggcttgatagaagaccagccatat
gaagctattgaagtggattttgcaaatgagtattttggaggaggagctcttggtcaggga
tgtgtgcaggaagaaatccgattcatgataaatccagagttaattgttgggatgcttttc
ttgccttcaatgaatgctaatgaggccattgaaattgttggagtagagagattttcctct
tacagtggatatggccactcttttcaattcatgggtgactatcaagataacaagccctat
gattcaatgggaaggcggaaaacatggattgttgctatagatgctttatctaatccaaga
atgaggcaatatggaattgaataccttgttcgggagacaaataaagcattatgtggattt
ttcgaccaatcaaagtacaagtgcagaattgaggatattggaagttccgaaagtaaaggt
aacccggaaggaactagtgtcagcgaaagttctcaagtgagaaattttcaaggcagcaga
ggaatcgcaactggaaactggggatgtggtgcttttggtggtgaccctgaaatcaaaagc
atgattcagtggcttgctgcatcagagggattgagacctttcatccattattattcattt
ggagaagcagctttgcagaaattagaagaggcaacccgatggatcctgcagcatggatgg
acagtcagtgatctttggagcatgttagctgaatattgcgaccaaaggctgagttccaaa
accttcaatgggttctttgattggctactaccttgtaattaa
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