Zingiber officinale (ginger): 122041904
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Entry
122041904 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122041904
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122041904
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122041904
03036 Chromosome and associated proteins [BR:
zof03036
]
122041904
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122041904
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122041904
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122041904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
122041904
NCBI-ProteinID:
XP_042457703
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All DBs
Position
2A:complement(109319653..109331145)
Genome browser
AA seq
511 aa
AA seq
DB search
MIKQILNRLPRKPSKASDNSVGGPIPPSSSSSSSRSGDLQGSRITSLNSQAPPGSNPGLN
HLNKYSPTINSRLNGSYVPVYEALPSFKDVQHSERQNLFIRKLDLCCDVFDFTDPTKNLK
EKDIKRQTLLELVDYVTSASGKFPENVMEETTKMVSLNLFRNLTIPPREHMVLEKIDAEE
EEPVMDPAWTHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLRLLDLFDSEDPREREYL
KTILHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGIAELLEILGSIISGFALPLKEE
HKLFLVRALIPLHKPRCIAMYHQQLSYCVTQFIEKDCKLADTVIRGLLKYWPITNSTKEV
MFLGELEEVLEATQPADFQRCMVPLFHKISRCLNSSHFQVAERALFLWNNDHIENLIKQN
SKVILPIIFPALERNSKRHWNQAVQSLTLNIRKIFSDHDPDLVAECLKKFEEDEAKNKEI
ISKREDTWKRLEAVAASNAAKKGPSGSKVQG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcagatactaaaccggctcccacggaaaccgtcaaaagcatctgataattca
gttggtggacccattcctccatcttcttcttcaagcagctctaggagtggagatttgcaa
ggcagtaggatcactagtcttaacagtcaggcccctcccggttcaaatcctgggctaaat
catctaaacaaatattctccaacaattaattcgagattgaatggaagctatgtcccagta
tatgaagctttgccaagttttaaggatgttcaacattctgagaggcagaatttgttcatc
agaaagttggacttgtgttgtgatgtatttgatttcactgacccaacaaagaacttgaaa
gagaaagacataaaacgacagactttattggaacttgtcgactatgtgacttcagcaagt
ggcaaatttccagaaaatgtcatggaagagacaaccaagatggtatctctcaacttgttc
agaaacctaactattccacctcgagagcacatggttttggaaaaaattgatgcagaagag
gaagaacctgtaatggatccagcatggactcatttgcagattgtttatgagttttttcta
cggtttgttgcatcgccagagactgatgctaagttggcaaaaaggtatatagatcattcc
tttgttcttaggctccttgacctatttgattctgaagatcctagagagagggagtactta
aagacaatacttcaccgtatctatggaaaatttatggtccatcgacccttcatcagaaaa
gctataaacaatatattttatcggtttatctttgagacggagaaacacaatgggatcgct
gagctattggagattttgggcagcatcatcagtgggtttgcattaccattaaaagaagaa
cataaattattccttgtaagggccctgatcccacttcacaaaccaaggtgcatcgcaatg
taccatcagcagttatcctattgcgtaactcaatttattgagaaggattgcaaacttgct
gatactgttataaggggcttattgaaatactggcctattacaaacagtacaaaagaagtc
atgttcttgggagagttagaagaggtcctggaagcaacacagcctgcagattttcaacgt
tgtatggttccactgtttcacaagatttctcgatgtttgaacagttctcattttcaggtg
gcagaaagagcattgttcctttggaataatgatcacatcgagaacttgatcaaacaaaat
agcaaggtcatactgcccatcatctttcctgcattggagagaaactcaaagagacactgg
aatcaagctgttcaaagtctcaccctcaacattcgcaagattttctctgatcatgatcct
gatctagtagccgagtgcttgaagaagtttgaggaggatgaagcgaaaaacaaggaaatt
atttcaaaacgcgaagacacatggaagcgccttgaagctgttgctgcttcaaatgctgca
aagaagggtccttcgggatctaaagtacagggttaa
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