KEGG   Zingiber officinale (ginger): 122041985
Entry
122041985         CDS       T08725                                 
Name
(RefSeq) DNA repair protein RAD5A-like
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zof03400]
    122041985
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    122041985
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 ResIII DEAD zf-RING_5 Prok-RING_4 zf-C3HC4_4 RING_XB3-XBAT31 UBA_Rad5 zf-RING_4 AAA_34 zf-ANAPC11
Other DBs
NCBI-GeneID: 122041985
NCBI-ProteinID: XP_042457825
LinkDB
Position
2A:complement(115132596..115175427)
AA seq 1066 aa
MGINKVTDEGIALVRSVVGQEFSEMDIIRALHMANNDVSSAINIIFDTPHLRLTPGDKTI
GARRRSLDSPTSITIPVGRETIATAANVNLEPAAASATPACTPLTVDATSLANHEPVVAP
CKVESDLLEDGSPKVGAASDPYPSTDLKERDWWLVGSAELSGLSTCKGRRIKPGDKVIFS
FPLTNKVVSPSSGTRFPSRGRSVASCSEIVRFSTEEHGEVGRIPNEWARCLLPLVKANKI
RIEGFCKSSPEVLSIMDTIHLSVSVHINNLMIQKHHQMSLRSTNVAMEDLSVQPLPTLFR
LLGLIPFKKAEFTPEDLYTRKRPMESKDRSETDLPFENLRKLCANRSKIEDDKDHISDND
MDCIIGISDHSKLEEMTPPDSLQCELRPYQKQALHWMLQIEKGRYKEAATRLHPCWHAFR
VADKRAVAIYLNAFSGDVTLEFPSTLQMSRGGILADAMGLGKTIMTIALLLAQYGKGGSC
SSTRSQESLDANEVNNIHEQSQNATSKLSTIAGFRKLFQSKASLVGAGNLIVCPMTLLSQ
WKAEFETHTKPGSLNVYVHYGQNRTKDTKVLAQNDVVLTTYGVLASEFSTESTEENGVLY
LLNWFRVVLDEAHIIKSSKSQVSMAAASLTADRRWCLTGTPIQNNLEDLYSLLRFLRVEP
WGNWGLWNKLIQKPYEEGDERGLKLVQSILRSIMLRRTKSSTDAEGRPILDLPPAQVDVL
YCELSEAEKDFYEALYRKSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRG
DTQEFSDLNKLAKHFLKGGKGSIGGDPSAAPSKAYIKEVVDELQKGEERECPICLEAYED
AVLTSCAHRLCRECLLASWRSAISGLCPVCRKLVNKQDLITAPTDSRFQIDIEKNWVESS
KVSVLLRELENLRDFGAKSIVFSQWTGFLDLLEIPLSRHNFSFVRLDGTLNQQQRERVLC
QFAEDNNILILLMSLKAGGVGINLTAATSAFLMDPWWNPAVEEQAVMRIHRIGQTKSVAI
KRFIVKGTVEERMQIVQARKQRMISGALTDHEVRAARIEELKMLFT
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgggaatcaacaaggtcaccgatgaggggatcgcgctcgtccgatcggtggtcggtcag
gaattctcggagatggacattattcgcgctctccacatggcaaataacgacgtatcctcc
gctattaacatcatcttcgacactccgcacctccgcctcaccccgggcgacaaaaccatt
ggcgcccggaggagaagcctcgactcgcccacctctattacaatccccgtcggtcgagaa
accatagctaccgctgctaatgttaaccttgagcctgctgctgccagtgctactcccgcc
tgcacgccgcttaccgtggatgctacctctcttgccaatcacgagcccgtggttgcccct
tgtaaagtcgaaagtgatctccttgaggacgggagccccaaagttggggcagcctcggat
ccctacccttcgacagatttgaaggagagggattggtggcttgtgggaagtgccgagctt
tctgggctttcgacgtgcaagggtaggcggattaagccgggtgataaggtgattttttcc
ttcccgttgacgaataaggtggtttctccctcttctggaactcggtttcctagccgaggt
cgttccgtggcttcttgttctgaaatagtgcgcttctccactgaagagcatggggaggtt
ggtcgcatccccaatgaatgggctcgctgtcttttgcctttggtgaaagcaaataagatt
agaatcgaggggttctgtaaatcttctcctgaagttcttagtattatggatactatacac
ttatctgttagtgtgcatatcaataacttgatgatccagaaacaccatcaaatgtcactg
aggtccaccaatgtggcaatggaggatttgtcagttcagccacttccaaccctgtttaga
ttacttggtcttatccccttcaaaaaggctgagtttactccggaggatttatacactagg
aagcggcccatggagtccaaggacagatctgaaacagatttaccttttgaaaatttgaga
aaattatgtgccaacaggagcaaaattgaggatgataaagaccatatctcagataatgat
atggattgcattataggcatttctgaccattctaagttagaggaaatgactcctcctgac
agtttgcagtgtgagttacgtccctaccagaagcaagctcttcattggatgctgcagatt
gaaaaaggaagatacaaggaggcagcaacaaggctacatccttgttggcatgcgttccgt
gtagcagataagagggccgttgctatttatcttaatgcattttctggcgatgtaacactt
gaatttccaagcaccttgcaaatgtctagaggcgggattttggcagatgcaatgggatta
gggaagaccataatgacaatagctcttcttcttgctcaatatggtaagggaggctcatgc
tcttccaccagaagccaggagtctcttgatgcaaacgaagtgaacaatatacacgaacaa
tctcaaaatgctacaagcaagttatctaccatcgctggtttcagaaagttatttcaatcc
aaggcttcacttgtaggggctggcaatttaattgtatgccctatgactctattaagccag
tggaaggctgaatttgaaacccacactaagcctggatctcttaatgtctatgttcattat
gggcaaaatcgaacaaaagacacaaaggtgttggcacaaaatgatgttgttctaactacc
tatggtgttctggcatcagaattttcaactgaaagtactgaagaaaatggtgtactttac
ttgcttaattggttcagggttgtgcttgacgaagctcacataataaaatcttctaagagc
caggtctctatggctgctgcttctctaactgcagataggaggtggtgtctcactggcaca
cccattcagaacaacctggaggatttgtacagccttctacgatttctgagggtggagcct
tggggaaattgggggctatggaataaactcatacaaaagccctatgaggaaggtgatgaa
cgtggattgaaactggtgcagtctattctaaggtccataatgttaagaaggacaaaatca
agcacagatgcagaaggcagaccaattcttgatcttcctcctgcacaagttgatgtactt
tactgtgagctgtcagaagctgaaaaggacttctatgaagctctttatagaaaatcaaag
gtaaagtttgatcagtttgttgagcaaggtcgggttcttcacaactatgcttctatttta
gagttacttttacgccttcggcagtgttgtgatcatcctttcctagttatgagtcgaggt
gatacgcaagagttctcagatctcaacaagctcgcaaaacattttctaaaaggtggcaaa
ggtagcattggtggagatccctctgctgctccttcaaaggcttacattaaagaggttgtt
gatgaactgcagaaaggggaggaaagggagtgcccaatctgcctagaagcgtatgaggat
gcagtattaacttcatgtgcacaccgtctatgtcgtgagtgcctcttagctagctggcga
agtgcaataagtggtttatgtcctgtttgtaggaaattagtaaataagcaagatcttata
actgctcctactgatagccgtttccagattgacattgaaaagaattgggtggagtcttct
aaggtttctgtcctgcttcgcgaactagaaaaccttcgtgattttggtgctaaaagcatt
gtcttcagccagtggacaggttttttggatcttttggagatcccactttctcggcacaat
ttctcatttgttcgtttggacgggaccttgaatcaacagcaacgagaaagagtgctttgt
caatttgcagaggacaataatatattgatactacttatgtcattgaaggctggtggtgtt
ggaataaatcttacagcagcaactagtgccttcctcatggatccatggtggaacccagct
gttgaagaacaggctgtgatgcgaattcatcgtattggtcaaaccaaaagtgttgctatc
aaaagatttattgtaaagggaactgtggaggagaggatgcaaattgtacaggctcgaaaa
caaaggatgatatctggagctttaactgatcatgaagtgcgggccgcacgcatcgaagaa
ctaaaaatgctttttacatga

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