Zingiber officinale (ginger): 122042005
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Entry
122042005 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122042005 isoform X1
KO
K17925
sorting nexin-13
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zof04990
]
122042005
Domain-containing proteins not elsewhere classified [BR:
zof04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122042005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
122042005
NCBI-ProteinID:
XP_042457843
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Position
2A:complement(116085037..116094457)
Genome browser
AA seq
1126 aa
AA seq
DB search
MSSGMQTMRGLVDEAKNRVVLLLICVFGLSYLMSLTSSSVWVNLPAAAVVIIFSLYLSHE
LDIRRKPTPNKISIVSKSPQSIPVELLKFPIGKSDWRKKVNSPIVEVAIEQFTRHLVSEW
VIDLWYSRITPDRNGPEELVEIITRVIGEISCRARDVNLIDLLTRDVVNLLRDHLELYRY
SQSKIGRQENKNMPFDQRDIQIKLVLAADNKLHPALFSAEAEHKVLQNLVRGIMFVLFKP
EDLNCLYFRHTVRELLACTVIRPVLNLVNPRFINERIESLVLSRANNINKKFAPSAEEAP
IIMRRAHSVPSDDQTSCSLDHSSPGLELVQLKNDNQKTGPHESGIINGMHYTGKENESGS
KFGLIVTPRNHNDLPVSLDFVLDKAKDSWSKDTLLLNSQGMDEKKPGAYASEWAQMLDIL
SRRKTQALAPEHLDDLWAKGRNYKKKEASKLGKSVAQSSSITHSEPIESKIYIRDISKKF
PTSSQLENLPETDCNDSNHSDPSFEERIENTNHEETKSESLSSYTTDDESSSVTGLGSPG
TKVWESKNKKDSVSSSIRHPLEATETHGAKRSGKVHIHHRRTSRTLSVRKRSRSSNQKAP
LWQEVARTSFLLADGHDILKDSKNDTRTLELTDNSDTEARGRINNGATALSSVSTESSHS
SMKSHDILVLADTFLKLRCEVLGANIVKSGSGTFAVYSISVTDANNNSWFIKRRYRHFEE
LHRHLKEFPEYNLHLPPKHFLSSGLDLPVVQERCKLLDIYLKKLLQIPSISESIDVWDFL
SIDSQTYIFTDSLSVIQTLSVNLDDKPHEKSAKRFESIENIGSQFSSAEKNFDSEIKDSS
KVMTGSYSESDGLRMRKSHMEQIPGLNSRDQNNPYHDNSENDYESRLRNNTSYSGNSDQA
KNVSIAEVENLQESSKVVDTDGALNIPTECVPPNLSVPILNLVDVIFQLKDGGWIRRQAF
WIAKQLLQLGMGDAFDDWLIEKIQLLRTGVVIASAIKRVEQVLWPDGIFITKHPKRKATA
PISTPGTQSNLKSNPLTYEQQVEADRRAKFVYELIYLFSTEKAPPALVGLVGRKEYEQCA
QDIFFFLQSPFCLKHFAFELLELLLLSTFPELSEVVRECHEEKVSI
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggggatgcaaacgatgcgcggcttggtggacgaggccaagaatcgggtcgtc
ttgctgctcatatgtgtttttggcctctcctatctcatgtccttaaccagctcttcagtt
tgggttaacttgccagctgctgctgttgtgatcattttttctctttatttatcacatgaa
cttgatatccgaagaaagcctacaccgaataaaatttcaattgtcagcaaatctcctcaa
agcatacctgtcgaactactcaagtttccaattgggaaatcagactggagaaagaaggtg
aattcgcccatagttgaagtagcaatagagcaattcacaagacacctagtttcagagtgg
gtgattgatctttggtactcacgtataacacctgacagaaatggtccagaagaattagtt
gaaatcatcactagggtcattggagaaatttcttgccgggcaagagatgtaaatcttatt
gatcttttgaccagggatgttgtcaatctacttcgtgaccatttggagctttaccgttat
agccagtctaagattgggaggcaggaaaataagaatatgccatttgaccagcgagatata
caaattaaattagttctagctgctgacaataaattacatccagcattattctctgcagaa
gctgagcacaaggttttgcagaatttggttcgtggaattatgtttgtacttttcaagcca
gaagatttaaattgcttatactttcgccacacagttagagagcttcttgcttgtactgtg
attaggccagttttgaacctagttaatccaaggttcataaatgaaaggatcgagtctttg
gttttatctcgtgccaataatattaataagaaatttgcaccatcagctgaagaagcacca
ataatcatgcggagagcacattcagtaccttcggatgatcaaacttcatgttcactggat
cactcaagtccaggtcttgaacttgtacaattaaaaaatgacaatcagaagactggtcca
catgagagtggcataattaatggaatgcattacactgggaaggaaaatgaatctgggtct
aagtttggtttgattgtcacaccaaggaatcataatgatcttcctgtttctttagacttt
gtcctcgacaaagctaaggattcttggtcaaaagacactttgctattgaattctcaaggt
atggatgagaagaaacctggtgcatatgcaagtgagtgggcacagatgttggacattctt
tcaagaagaaagacacaagctcttgcaccagaacatttggatgatctttgggcaaaagga
cgaaactataaaaagaaagaagcaagtaaattaggaaaatcagtggcacaaagttcatct
atcactcattctgagccaattgaaagcaaaatatacattcgggacatatccaagaaattc
cccacttcctcccagctggaaaatttgcctgagacagattgtaatgactctaaccattca
gatccatcatttgaagaaagaatagaaaatacaaaccatgaagagactaaatcagaaagt
ttaagttcctatacaactgatgatgaaagcagtagtgtgacaggtcttggttctccaggt
acaaaagtatgggaaagcaaaaacaagaaggattctgtttcttcaagtatacggcatcct
cttgaagcaactgaaactcatggagcaaagagaagtggtaaagttcatattcatcatcgt
cggacatcaagaacattgtcagtaagaaaaagatctaggtcaagcaatcaaaaggcccca
ctgtggcaggaggttgcaagaacatcatttttgttggctgatgggcatgacatactcaag
gactcaaaaaatgatactagaacacttgaattaactgacaactcagacacagaagctagg
ggtagaatcaataatggggctacagctttgtcttctgtttcaactgagtcttctcattcg
tctatgaagtctcatgatatccttgttttggccgatacatttttgaagttgagatgcgag
gtactaggcgccaatattgtaaaaagtggttcaggaacatttgctgtctattccatttcg
gtgaccgatgcaaataacaatagttggttcattaaaagaaggtaccgccattttgaggag
ctacatcgacatctaaaagagtttccagagtataacttacatttgccacccaagcatttt
ctatcatctgggctggatcttcctgtggtccaggaaagatgtaaacttcttgacatatat
ttgaagaagttacttcaaattccaagcatatcagagtctattgatgtttgggatttcctc
agtattgattcacagacttacatttttacagattctctctccgtcattcaaactttatca
gttaatcttgatgataagccacatgaaaagagtgcaaagaggtttgaatcaattgaaaat
attggtagtcagttctcttctgctgagaaaaattttgattctgagatcaaagacagttct
aaagtaatgactggtagttattctgaatctgatggtttaagaatgagaaaatcacatatg
gagcaaattcctggtcttaatagcagagaccagaacaatccatatcatgacaattcagaa
aatgattatgaaagcagactcagaaataatacttcatattctggtaactctgaccaggca
aaaaatgtctcaatagctgaagttgaaaatttgcaagagagctctaaagttgtagatact
gatggggcattgaacattcctactgaatgtgtaccgccaaatttgagtgttcccatacta
aatttagtagatgttattttccagctgaaggatggtggttggataaggcggcaagcattt
tggatagctaagcagctgttacagttgggaatgggtgatgcttttgatgactggcttatt
gagaaaattcaacttcttagaacaggagtggtaattgcttctgcaatcaagcgtgttgag
caggttctatggcctgacgggattttcataactaagcatcctaagcgaaaagctactgca
cccatttcaactccaggcactcagagcaacctaaagagcaatccattgacttatgaacaa
caagtagaagctgatcgtcgtgccaaatttgtgtatgaactaatatatcttttttcaaca
gagaaagcgccacctgctcttgttggtcttgttggccgaaaggaatatgaacagtgtgcg
caggatatatttttcttccttcagtctcctttttgcttgaagcactttgcgtttgaactc
cttgagctgttgcttttgtcgaccttccctgagctcagtgaggttgtcagggaatgccat
gaagaaaaagtatcaatttag
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