Zingiber officinale (ginger): 122042016
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Entry
122042016 CDS
T08725
Name
(RefSeq) chlorophyll a-b binding protein of LHCII type 1-like
KO
K08912
light-harvesting complex II chlorophyll a/b binding protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00196
Photosynthesis - antenna proteins
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
122042016
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
zof00194
]
122042016
Photosynthesis proteins [BR:
zof00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
122042016
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GFIT
Motif
Pfam:
Chloroa_b-bind
PhosphMutase
Motif
Other DBs
NCBI-GeneID:
122042016
NCBI-ProteinID:
XP_042457862
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All DBs
Position
2A:116403716..116404885
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AA seq
317 aa
AA seq
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MKREIEIAKDKLTTFSRSPLTLKLTLPSPQHITPPHRINTFPSSLTSLLLLQFMASTMAL
SSPSFIGKPVKLASSDGLGGGGRFTMRKTGGRPKPASASPWYGPDRVKYLGPLSGDPPSY
LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVTPELLSRNGVKFGEA
VWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGAVEGYRIGGGPLGEVNDPL
YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD
PVNNNAWAYATNFVPGK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgagatagagattgcgaaggataagctcaccacattttcccgctctcccttg
actcttaaattgacactccccagtccccaacacatcacgcctcctcatcgaattaacacc
tttccttcatcactcacttctctgctcttgctccagttcatggcttccaccatggcgctc
tcctccccttccttcattggcaagcccgtcaagctcgcctcctccgatggcctcggaggt
ggtggccggttcaccatgcgcaagaccgggggtaggccaaagcctgcctcggccagcccc
tggtacggccccgaccgcgtcaagtacctcggcccactctctggtgatcccccctcctac
ctcactggagagttccccggagactatggatgggacactgcaggcctctccgccgacccc
gagaccttcgccaagaacagagaattggaggtgatccactgccggtgggccatgctcggc
gcgctgggctgcgtcaccccggagctactctcccgcaacggtgtcaagttcggcgaggca
gtgtggttcaaggccggctcgcagatcttctccgagggcgggcttgactatctcggcaac
cccaacctggtccacgcacagagcatcctggccatatgggcgtcccaggtggtgctgatg
ggggccgtcgaggggtaccggatcggcggcgggccgctcggtgaggtgaacgatccactg
taccctggcggtagctttgacccgctgggactcgccgacgaccctgaggccttcgcggag
ctgaaagtgaaggaaatcaagaacgggcggctcgccatgttctccatgttcggattcttc
gtgcaggccatcgtcaccgggaagggaccgctggagaacctcgctgaccacctcgccgat
ccagtgaacaacaacgcctgggcctacgccaccaacttcgtccctggcaaataa
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