Zingiber officinale (ginger): 122042108
Help
Entry
122042108 CDS
T08725
Name
(RefSeq) transcription factor TGA4-like isoform X1
KO
K14431
transcription factor TGA
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122042108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122042108
Transcription factors [BR:
zof03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
122042108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
SH3_CYT4
adh_short
Motif
Other DBs
NCBI-GeneID:
122042108
NCBI-ProteinID:
XP_042457988
LinkDB
All DBs
Position
2A:complement(120079267..120088066)
Genome browser
AA seq
392 aa
AA seq
DB search
MYSTMNCWDLKSQHVCLHGDFMHSSSRMSSALSQFVSPRKMVRYEPNHQIIMWENSLNAD
NSQNTASSSMVETNVKLDSRLEDGPHTTVRQSKKYDQEARKPADKVSRRLAQNREAARKS
RLRKKAYVQQLESSRLKLAQLEQGLGRARQQGAYVGGSLGESTLSLSASVNSGVTAFEME
YSHWVDEQSRQTNELRAALQAHVSDIELRMLVETGLSHYDNLFRIKAIAVKSDVFYLMSG
MWKTAAERFFLWIGGFRPSELLKVLLPQLDPLTEQQMHAVYNLQQSSQQAEDALSQGMEK
LQQTLAEILASDASGSDGVANYMGQMVNAMGNLEALVNFVSQADNLRQQALQQMYKILTI
RQAARGLLALGDYYQRLRALSSLWAARPREPA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtactcgaccatgaattgttgggacctcaaatcacagcatgtttgtctgcatggtgat
ttcatgcatagttcaagtaggatgagctctgcattgtctcaatttgtgtcccctagaaag
atggtaagatatgaaccaaatcaccagataatcatgtgggaaaattccttaaatgctgac
aacagccaaaatacagcatcatcatcgatggtggagaccaatgtcaaactcgatagtagg
ttagaagatggtccacataccacagtacgacaatcgaaaaaatatgaccaggaagccagg
aagcctgcagataaggtatcaagacgactggcacagaacagagaggctgctcgaaaaagt
cgtctaagaaaaaaggcttatgttcaacaattggaatcaagtcgtttgaaactagctcag
ctggagcaggggcttggtcgagctaggcagcagggtgcatacgtgggtgggagtttagga
gagtcaactctgagcctatcagccagtgttaactcaggtgttactgcatttgagatggaa
tattcacactgggtagatgaacagagccgacaaaccaatgaacttagagctgcactacaa
gcacatgtatccgatatagagcttcgtatgctcgttgagactggattgagtcactatgac
aatctctttcgaattaaagcaattgctgtgaaatctgatgtcttctatcttatgtctggc
atgtggaagacagctgctgaacgatttttcctatggattggcggttttcgcccttcagaa
cttctgaaggttctcttaccacagctagatcctctgaccgagcagcaaatgcacgcggta
tataacttgcagcaatcttctcagcaagccgaggatgctctttcgcaagggatggagaaa
cttcaacagactctagctgagattttagcgtccgatgcctctggttctgatggtgttgcg
aattacatgggacagatggtgaatgctatggggaacctggaggctcttgtaaatttcgtg
agccaggcggataaccttcggcaacaagccttgcagcagatgtacaagattctcacaatc
cgacaagcagcaagaggtctccttgccctcggcgactactaccaacgccttcgtgccctt
agctcgctgtgggctgctcgtccccgcgaaccagcttag
DBGET
integrated database retrieval system
