Zingiber officinale (ginger): 122042185
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Entry
122042185 CDS
T08725
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122042185
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122042185
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122042185
03036 Chromosome and associated proteins [BR:
zof03036
]
122042185
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122042185
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122042185
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122042185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
PDS5
HEAT_EF3_N
Htt_N-HEAT_1
Cnd1
SCD
CLASP_N
TAF6_C
Adaptin_N
CEP104-like_TOG
TPR_TNPO3_IPO13_3rd
NopRA1
Motif
Other DBs
NCBI-GeneID:
122042185
NCBI-ProteinID:
XP_042458108
LinkDB
All DBs
Position
2A:complement(123506065..123525704)
Genome browser
AA seq
587 aa
AA seq
DB search
MAANDEPLYPIAILIDELKNEDIQLRLNSIRRLSIIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVREKAVESLCRIGAQMKES
DLAEWFIPLAKRLAAGEWFTARVSSCGLFHVVYPSATDPLKAELRSIFAQLCQDDTPMVR
RAAASNLGKFAATLEQSHLKSDIMSMFEDLTQDDQDSVRLLAVEGCAALGKLLESQDCIA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEATRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPQLAIQHILPCVKELSTDSSQHVRAALASVIMGMAPTLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVALAEDRHWRVRLAIIEY
IPLLASQLGIRFFDDKLGALCMQWLEDKVFSIREAAANNLKRLAEEFGPEWAMQHIIPEV
LEKINSPHYLYRMTILRAISLLAPVVGADITSEKLLPIVIASSKDRVPNIKFNVAKVLHS
LVSILDQSLVDKTIRPCLVELTEDPDVDVRYFANQALEACDQVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaatgatgagccattatacccaattgctatactgattgatgaattgaagaat
gaagacattcagctgcgtctaaactctatccgtaggctttctatcattgcacgtgctctt
ggggaggaaaggacccgaaaagaattaattccatttctcagtgaaaacaatgatgatgac
gatgaagttcttcttgccatggcagaagagttgggtgtttttattccttatgttggcggt
gtggaacatgctcatgtgttgcttccacccctcgaaactttatgcactgtagaggaaact
tgtgttagggagaaagcagtggaatcactctgccgtattggagcacaaatgaaggaaagt
gatttagcagaatggtttattcctttagcaaagaggctagcggctggtgagtggttcact
gctcgtgtctcctcctgtggtctctttcatgttgtttatccaagtgccacagatccattg
aaagcagaacttagatccatttttgcacaattgtgccaagatgacacacctatggtcaga
cgagctgctgcttccaatcttggaaaatttgcagctacccttgaacaaagccatctaaag
tcagacatcatgtccatgttcgaggacctaactcaggatgatcaggattctgtgcgatta
ttggcggttgagggttgtgcagcacttgggaagttgctggaatcccaggactgtatagca
catatccttcctgtcattgttaacttctcacaggataagtcctggcgtgtacgttacatg
gttgcaaatcaattgtatgagctttgcgaagcagttggtcctgaagcaacaagggctgat
ttggtacctgcatatgtccgtcttcttcgtgataatgaggctgaagtacgcattgctgct
gctggaaaggtgacaaaattttgtcggatcctgaatccacaacttgcaattcagcatatt
ctcccatgtgttaaggaattatcgacagattcatctcagcatgttcgtgcagctcttgct
tccgtaatcatgggcatggcacctacattagggaaggatgcaaccattgaacaacttctt
cccattttcctttctttgctcaaagatgagtttccagatgtccgattgaatataatcagc
aaacttgatcaagtaaatcaggttattggtattgacttgttatcccaatctctattacct
gctattgttgcccttgccgaggataggcattggcgagtacgccttgccataattgagtac
attcctttgctggctagtcagcttggtattagattttttgatgataaacttggcgctctt
tgcatgcagtggttggaagataaggttttctcaattcgggaggcagctgctaataacttg
aagcgtcttgcagaagaatttggtccagaatgggcaatgcaacacataattccggaggta
ctagaaaagatcaatagcccacattatctttatcgtatgaccattctacgagcaatttct
cttcttgcccctgttgtgggtgctgatatcacgagcgagaagttattgcccattgtgatt
gcttcctcaaaggacagggtgcccaacatcaagttcaatgttgcaaaggttttacacagt
cttgtttccatactcgaccaatctctggtggacaagacgattcgaccttgcctggttgag
ctcaccgaggaccctgatgtggatgtcaggtatttcgcgaaccaagcactggaagcatgt
gatcaagttatgatgtcaagctag
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