Zingiber officinale (ginger): 122042202
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Entry
122042202 CDS
T08725
Name
(RefSeq) myosin-6-like isoform X1
KO
K10357
myosin V
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122042202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122042202
04131 Membrane trafficking [BR:
zof04131
]
122042202
03029 Mitochondrial biogenesis [BR:
zof03029
]
122042202
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
122042202
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122042202
mRNA cycle factors
P-body specific factors
122042202
Membrane trafficking [BR:
zof04131
]
Others
Actin-binding proteins
Myosins
122042202
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122042202
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122042202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Hpr_kinase_C
Flp1_like
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
122042202
NCBI-ProteinID:
XP_042458135
LinkDB
All DBs
Position
2A:124367879..124386051
Genome browser
AA seq
1512 aa
AA seq
DB search
MARKFSVAVGSQVWVEDPDVAWIDGEVLEVKGSEIKISCSTGRTVTAKISDVHPKDPEAS
PSGVDDMTKLAYLHEPGVLQNLRARYDINEIYTYTGNILIAVNPFRRLPHLYDRYMMEQY
KGAAFGELSPHPFAVADTAYQLMRNEGISQSILVSGESGAGKTESTKMIMRYLAFMGGRA
ASGGRTVEQQVLQSNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDERGRISGAAIRTYLLE
RSRVCQISDPERNYHCFYMLCAAPPEDRKRYKLENPRTFHYLNQSNCYQLDGVDDSKEYE
ETKKAMDIIGISFDEQDAIFRVVAAILHLGNIEFTDGQETDSSQPKDAKSCFHLQTAAEL
FMCDEKALEDSLCKRVIITRDENIIKTLDPEAATLSRDALAKVVYSRLFDWLVNKINNSI
GQDPKSKCLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIS
WSYIEFVDNKDILDLIEKKPGGIIALLDEACMLPRSTHVTFAQKLYQAFKDHKRFSKPKL
SRSDFTICHYAGEVTYKTELFLDKNKDYVVAEHQALLSASRCFFVSNLFPPLSEDTSKSS
KFSSIGLRFKQQLQSLLETLNATEPHYIRCVKPNNLLKPSIFENHNVLQQLRCGGVMEAI
RISCAGYPTRRAFSTFVDRFGILAPEVLDGRSYDDITAAKRLLERADLKGYQIGKTKVFL
RAGQMAELDAHRKEVLGRSASTIQRKVRSYLVRRAFIVLKKSAIQIQTTCRGQLAKQIYE
SMRRQAAAIRIQAFFRMHLGRNVYGELLSSAITIQAGLRGMSAREEFHFRRQTKAAIIIQ
SHCRQYFASLNYSMTKKAAITTQCAWRGRVARKDLRMLKLAARETGALQAAKNKLEKQVE
ELTWRLQLEKRMRADLEENKTQENAKLQAALLEVQQQSKEAKSLLAKEREAAKKAAELVP
IIKEVPVVDTTLMDKLRGENEKLKVLVSSLEMKIDETEKKFEETSKISEERLKKAMDSEA
KIIQLNNSVLRLKEQLSNMESENQILRQQTLLHSPVKHMSEHLSNPTTPSKHNLENGDHH
IEEPKEPQSAPPAFKNYENAEAKLSKLYAEKQLESFDALVSCVRRNIGFSQGKPVAALTI
YKCLLHWKSFEAERTSIFDRLIQTIGSAIENEESNDHLAYWLSNASNLLFLLQKSLKASG
ANQRQRPPAPTSLFGRMTQSFRSSASFNNLAVDGLDVVRHVEAKYPALLFKQQLTAYVEK
IYGMIRDNVKKNLSSMLSLCIQSLRTRETMLRGSGRSFGKEGQSNYWKAIVESLADLLKM
LQENCVPSILIEKMNMQIFSYINVQLFNSLLLRRECCSFSNGEYVKDGLAELELWCVKAK
PEYVGSSWDELKHIRQAVGFLVIFQKYRISYDEIVHDLCPVLSVQQLYKICTQYWDDNYN
TKTVSPEVLSRMQVLMAEDSNIAESSSFLLNDNSSIPFSVDDMSSTLQAKDFSDVRSAEG
LIQNPAFQFLQE
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaaattcagtgtagcagtaggttcacaagtctgggttgaggatcctgatgtc
gcttggatagatggagaagtcttggaggtcaagggcagtgagattaagatcagctgtagc
actgggagaacggtgactgctaagatctctgatgtccaccctaaggatcctgaagcttca
cctagtggagtggatgacatgaccaaacttgcttatttgcacgaaccaggcgtgctacaa
aacttgagagctagatatgacattaatgaaatttatacttacaccggaaatattttgatt
gctgtcaaccccttccgacgtttgcctcatctatatgatcgatatatgatggaacaatat
aaaggggcagcttttggcgaattaagtccccatccttttgctgttgcggatactgcctat
caattgatgagaaatgagggaataagtcaatcaattttagtaagtggggaaagtggagca
ggtaaaacagaaagcacaaagatgatcatgcgttatctcgccttcatgggtggtagagct
gcatcaggagggcgaactgttgagcaacaagtgctgcagtctaatcctgttcttgaagcc
tttggaaatgcaaagacagtaagaaacaacaactcaagccgttttggcaagtttgtcgag
attcaatttgatgagaggggaaggatctccggagctgccatcagaacttaccttcttgaa
agatctcgcgtttgtcagatatctgatcccgaaagaaattatcactgcttttacatgctc
tgtgcagccccaccagaagatcgtaagagatacaagctggaaaatcccaggacctttcat
tatctcaaccaatccaactgctatcagcttgatggggtagatgattccaaggagtatgag
gaaactaaaaaggctatggacatcattggcatcagttttgatgaacaggatgccattttc
cgagtcgtagctgctattctccatttgggaaatattgaattcacagatggacaggaaaca
gattcttctcaacccaaagatgcaaaatcatgcttccatttgcaaactgctgctgagcta
ttcatgtgtgatgaaaaggctcttgaagattctttatgtaagcgtgttattattactcgt
gatgagaacataataaaaaccttggatccagaggctgcaactttaagtagagatgccctt
gcaaaagttgtatattcaagattgtttgattggcttgtaaataagatcaacaactcaatt
ggtcaagatcctaaatctaagtgcttaatcggagtgctggatatatatggctttgaaagt
tttaagactaacagttttgagcagttctgtatcaacctgacgaatgaaaaattacagcaa
cacttcaatcagcatgtttttaagatggaacaagaagaatatactaaggaagagatcagt
tggagttatatagagtttgttgataacaaggacatcctagatcttattgaaaagaaacct
ggtggaataattgctctcctggatgaggcttgcatgctgcccagatcaacacatgtaact
tttgctcagaaactctaccaggcttttaaagatcataagcgctttagcaagccaaaatta
tcccgttctgactttaccatttgtcattatgctggtgaagtcacatataagacagagttg
tttttagacaagaacaaggactatgttgttgctgagcatcaggctctcttgagtgcttct
agatgtttttttgtttcaaatttatttccacctctgtctgaggacacttcaaaatcttca
aagttctcatcaattggcttaagattcaagcaacaactgcaatctcttctggaaactctt
aatgccactgagccacactatattcgctgtgttaaacccaacaatcttttgaaaccatca
atatttgagaatcataatgttcttcaacaactccgctgcgggggagtgatggaagccatt
agaataagctgtgccggatatccaacaaggcgtgcattttccacatttgttgaccgtttt
ggcattctcgcaccagaagttttagatggaagaagttatgatgatatcactgcggcaaag
agattgctagagagggcagatctcaaaggttaccagattggaaagacaaaggtgtttctt
cgagctggtcaaatggctgaacttgatgcccataggaaggaagttctgggaagatctgct
agcacaatccaaagaaaagttcggtcataccttgtccgcagggctttcattgttcttaag
aaatcagccatacagattcaaaccacatgcagaggacaattggcaaagcaaatttatgag
agcatgcgtagacaagctgctgcaattcgaattcaggcatttttccgcatgcatcttgga
aggaatgtgtatggagagttattgtcttcggctattaccatccaggctggtttacggggg
atgtctgctcgtgaggaatttcattttaggaggcagacaaaagctgcaattattattcag
agtcattgtcgtcaatacttcgcttctttgaattattcaatgacaaagaaagctgcaatc
actactcaatgtgcttggagaggaagggttgcaagaaaagatctgcgaatgcttaaactg
gcggctagagaaactggtgctcttcaagctgcaaagaataagttggaaaaacaagttgag
gaacttacatggcgtctgcagttggaaaaacgcatgagggctgaccttgaggaaaataaa
acacaagagaatgccaaattgcaagctgctttgttagaagtgcaacaacaaagcaaggag
gctaagtctttgctagctaaggagcgtgaggctgccaaaaaggctgctgagctagttcct
attattaaagaggttcctgttgttgatacaacgctaatggataagcttagaggtgaaaat
gagaagctcaaggttttggtgagctcactggaaatgaaaattgatgaaactgagaagaag
tttgaagaaacaagtaaaattagtgaagaaaggttgaagaaggccatggattctgaggct
aagataattcagttgaataattcagtattgaggcttaaagagcaactgtctaacatggaa
tctgagaatcagattctgcgacagcagaccttattgcattcccctgttaaacacatgtca
gagcatttatcaaatccaactactccttccaaacataatttggagaatggtgatcatcat
attgaagagccaaaggaacctcagagtgccccaccagcatttaagaactatgagaatgct
gaagctaagttgagcaaattgtatgctgagaaacaacttgagagttttgatgccctagtc
agttgtgtcagaagaaatattggatttagccagggaaaaccagttgctgcattaaccata
tacaaatgccttcttcactggaaatcctttgaagctgagaggactagtatttttgatcgt
ctcatccagacgattggctctgcaattgaaaatgaagagagtaatgatcatcttgcttat
tggctttcaaatgcttctaatttgttgtttttgctgcaaaaaagtctaaaggcctcggga
gctaatcaacgtcaaagaccacctgctccaacatctttgtttgggagaatgacccaatca
tttcgttcttcggcatctttcaataaccttgctgtggacggcctggatgttgtgcgccat
gttgaagcaaaatatcctgccttgcttttcaagcagcagctaacagcttacgtggagaag
atttatggaatgatacgggataatgtgaaaaagaatttgtcttctatgctttcactatgt
atacagtccctaagaacaagggaaacaatgttgcgaggctctgggcgttcatttggaaaa
gaaggacaaagtaactactggaaggccattgttgagagtttagctgaccttctgaagatg
ctgcaagaaaactgtgtgccttctattctgattgaaaaaatgaacatgcagattttttca
tacataaatgtacaattatttaacagtttgctgcttcgtcgtgagtgttgctccttcagc
aatggggagtatgtaaaagatggtttggctgagctggagttgtggtgtgtgaaagcaaaa
ccagagtatgttggatcatcctgggatgaacttaaacacatcagacaagctgttggtttc
ttggttatattccagaagtatagaatttcatacgacgagatagtccatgacctatgcccg
gttctcagcgtgcagcaactttataaaatatgcacacaatactgggatgacaactacaac
acaaagactgtttctccagaggttctttcaagaatgcaagtactgatggcagaggattct
aacattgccgaaagcagttccttcctgttaaatgataactccagcattcctttctcagtt
gatgatatgtctagtactctacaagcaaaggatttctcagacgtcagatcagcagaggga
ctcattcagaacccagccttccaatttttgcaggaatga
DBGET
integrated database retrieval system
