Zingiber officinale (ginger): 122042219
Help
Entry
122042219 CDS
T08725
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B-like
KO
K03064
26S proteasome regulatory subunit T4
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
122042219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
zof03051
]
122042219
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
122042219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
AAA_2
RuvB_N
PRS7_OB
AAA_22
nSTAND3
DUF815
Prot_ATP_ID_OB_N
AAA_7
AAA_14
TIP49
Parvo_NS1
AAA_33
RNA_helicase
Mg_chelatase
AAA_18
IstB_IS21
AAA_28
NPHP3_N
AAA_3
TsaE
AAA_24
NACHT
Sigma54_activat
AAA_11
bpMoxR
ABC_tran
AAA_lid_PRS2_C
ATPase
ATPase_2
NB-ARC
ResIII
eIF-1a
PhoH
Sec8_N
AAA_30
AAA_25
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
122042219
NCBI-ProteinID:
XP_042458155
LinkDB
All DBs
Position
2A:complement(124929458..124936752)
Genome browser
AA seq
399 aa
AA seq
DB search
MVDASDDATRRRNALADYRKKLLQHKELESRTRTLRETLKTTKKEFSKTEDDLKSLQSVG
QIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPRE
VDPVVHNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFSYAREHQPCIIFMDE
IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
LDRKIEIPLPNEQGRMEVLKIHAAGIAKHGDIDYEAVVKLAEGFNGADLRNVCTEAGMSA
IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggtagacgcctcagacgacgccactcgtcgccggaatgcgctggccgattaccgaaag
aagctcctccagcacaaggagctagaatccaggacgcggacgctaagggagactttgaag
accacaaagaaggaattcagtaaaaccgaagatgatctaaagtctctccaaagtgttggg
caaataattggagaggttcttaggccacttgataacgagcgtttcattgttaaggcaagc
agtgggcctaggtatgttgttggctgcaggagcaaagttgacaaggagaagctgacagct
ggaactagggttgttcttgacatgactactcttaccattatgcgtgctcttccacgagag
gttgatcctgttgtgcataacatgctccatgaagatcctggaaatgttagctattctgct
gtaggtggactatctgatcaaataagggaactgagagagtcaattgagttgcctcttatg
aatcctgaacttttccttagagtaggaattaaacctccaaagggagtcctactgtatggt
cctcctggaactgggaagacattgctggccagagcaattgctagtaatatagatgcaaac
tttttgaaggttgtatcaagtgctataattgacaaatatataggtgaaagtgcaagattg
atcagggaaatgtttagctatgcacgcgaacaccaaccttgcattattttcatggatgaa
attgatgcaatcggaggacgtcggttcagtgagggaaccagtgccgatcgtgagattcaa
cgaacccttatggaactgcttaatcaactagatggatttgatcaattagggaaggttaaa
atgattatggcgacaaatcgacctgacgttctggatccagctcttcttcgacctggccgg
ctggatagaaaaattgagatcccattaccaaatgaacaggggaggatggaagttctcaag
atccatgctgctggtatagcaaaacatggtgacattgactatgaggcagttgtaaaactt
gctgagggttttaatggagcagatctccggaatgtatgtacagaggctggtatgtcagct
attagagcagaacgtgactatgttatccatgaagacttcatgaaggctgtcaggaaactg
aatgaagcgaagaagctggaatcgagtgctcattataatgcagatttcggcaaggattaa
DBGET
integrated database retrieval system
