Zingiber officinale (ginger): 122042236
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Entry
122042236 CDS
T08725
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic-like
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122042236
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122042236
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122042236
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
122042236
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class II (U)
122042236
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122042236
Prokaryotic type
122042236
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
EAD7
Motif
Other DBs
NCBI-GeneID:
122042236
NCBI-ProteinID:
XP_042458183
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All DBs
Position
2A:complement(126126936..126141587)
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AA seq
595 aa
AA seq
DB search
MPTVNVGRDRLFAALGETYTQEEFEELCFKFGIELDDVTTEKAIIRKERHLEEEQEVGDE
DEEVIYKIDVAANRYDLLCLEGIARALRIFNEKEASPLYTVTNVSPESILKMHVKPETSL
IRPFVVCAVLRGVAFDEARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTIQGPFSYEAL
PPQEINFVPLKQVKIFRADELLEYYKSDMKLKKFLHIIENSPVYPVIYDRNRTVLSLPPI
INGTHSAISLKTRNVFIECTATDLTKAKIVLNTMVTMFSEYCTNKFEVEPVEVVYSDGKS
MICPDLSVTRMEVPLSEIIDPIGISLDASEVVTLLNKMQLQAAHSSLANGDCNIVVSVPP
TRSDILHARDVMEDVAIAYGYNNIPKSKPKCMTTGGRQPLNRFSDKVRAEVARAGYMEVL
TWVLCSLEENFSMLRRKDDGDKAVIIANPRSADFEVVRTSLMSCLLKTLKHNVDHPRPIK
IFEVGDVVVLDGDRDVGASNNRRLAALYCNVSSGFEEILGLVERIMKVVRAPHIKVPDNY
LKPSEEPEYFPNRQCSIIFNGKQIGNFGIVHPEVLKKFGIPDPCSFMEIDIGSLL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgccgacagtcaacgtcgggagggaccgcctttttgctgccctcggcgaaacttatacg
caggaggagttcgaagaattatgtttcaagttcggcatcgagctcgatgatgttactact
gagaaagccatcattcggaaggagaggcatcttgaagaagaacaagaagttggtgatgag
gacgaggaggtcatatataagattgacgttgccgccaatagatacgatttgctctgtctt
gaaggaattgctcgagctcttagaattttcaacgaaaaggaagctagccctttgtataca
gtcactaatgtctcacctgaatcaatactcaaaatgcatgtcaaacctgagacctcattg
atccggccttttgttgtttgtgctgttttgagaggagtagcctttgatgaagcaagatac
aacagcttcattgacctgcaagataaattgcaccaaaatatatgtaggcgaagaacctta
gttgctattgggacacatgatttggatacaatacagggtcctttttcctatgaggcttta
ccacctcaagagattaattttgtgcctttaaagcaggtgaaaattttcagggctgacgag
ctgttggaatattacaaatcagatatgaagcttaagaagttcttgcacataattgagaac
tctcctgtgtacccagtgatctatgacagaaatagaactgttctctcacttccaccaatt
attaatggtacacattcagcaatcagcctaaagacaagaaatgtattcattgaatgtact
gccactgatttgacgaaagctaagattgttttgaatacaatggtgactatgttctctgaa
tattgcacaaataaatttgaggtagaaccagttgaggtggtttattctgatggtaaatct
atgatctgtcctgatctttcagttacaaggatggaggtccctttatctgagataattgat
ccaattggcatctctcttgatgcttccgaggtggtaaccttattaaacaaaatgcaactg
caagcagcgcattcatcattggccaatggagattgtaatattgttgtatctgtacctccc
actcgcagtgacattctacatgctcgtgatgtgatggaagatgtagctattgcatatgga
tacaacaacatcccaaaatcaaaacctaaatgcatgactactggagggagacaacctttg
aatcgcttttctgataaagtcagagctgaggttgcaagggcaggttatatggaagtctta
acgtgggttttgtgctcacttgaagaaaatttttcgatgctaaggagaaaggacgatgga
gataaagctgttatcatagcaaatcctcgttctgctgacttcgaggttgtcagaacgagt
ctgatgtcatgcttgttgaaaaccctaaagcacaatgttgaccaccccagaccgataaag
atatttgaagttggtgatgttgttgtgttggatggtgatcgggatgttggtgcatcaaac
aatcgtcgacttgcagcattatattgtaatgtttcctcaggatttgaggaaatcttggga
ttggtggaaagaataatgaaagttgtaagagcacctcatattaaagtcccagataattat
cttaagccctcagaagagccggaatattttcctaatagacaatgcagcattatatttaac
gggaagcaaattgggaatttcggaattgttcatcctgaggttctgaagaaatttggtatt
ccagacccttgttctttcatggagatcgatatcgggtcattgctttag
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