KEGG   Zingiber officinale (ginger): 122042243
Entry
122042243         CDS       T08725                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03013  Nucleocytoplasmic transport
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122042243
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122042243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    122042243
   04131 Membrane trafficking [BR:zof04131]
    122042243
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122042243
Membrane trafficking [BR:zof04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    122042243
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    122042243
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    122042243
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 122042243
NCBI-ProteinID: XP_042458190
LinkDB
Position
2A:complement(126436188..126438355)
AA seq 302 aa
MPAQKIETGHQDVVHDVQMDYYGKRLATASSDATIKIIGVSGSSHQHLATLSGHQGPVWQ
VAWAHPKFGSLIASCGYDGQVIIWKEGSKPDEWIQAHVFTEHKSSVNSIAWAPHELGLCL
ASGSSDGNISVFTARTDGGWDTTRIDQAHPVGVTSVTWAPALAPGALVGSGQLDPVQKLA
SGGCDNTVKVWKLYNGNWKMDCFPALHMHSDWVRDVAWAPNLGLPKSTIASASQDGTVVI
WTVGKEGDQWEGKVLHDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGQWQQVTTV
EP
NT seq 909 nt   +upstreamnt  +downstreamnt
atgcctgcacagaagatagagactggtcaccaggatgttgtccatgatgtgcagatggac
tactacggcaagcgtttggcaacagcatcttccgatgctaccatcaaaattatcggtgtg
agtggctcttctcatcagcaccttgcaaccctgagtggtcaccaaggaccagtatggcag
gtggcatgggcccatccaaaatttggttcattgattgcatcttgtggctatgacggccaa
gtgatcatctggaaggaaggcagcaaacctgatgagtggattcaggcgcatgtattcaca
gagcacaagagctctgtcaactccattgcgtgggctcctcacgagcttggcctctgcttg
gcttctggttcctcagatgggaacatctcagtcttcactgcacgaactgatggtggctgg
gacaccacaaggattgatcaggcgcacccagtgggtgtcacttctgtgacatgggctcca
gccttggccccaggtgctctcgttggttctgggcagcttgatcctgtacagaaacttgcg
tctggtggctgcgacaacactgtcaaagtgtggaaactctacaatggtaattggaagatg
gactgttttcccgctctccatatgcattctgactgggtgagagatgtggcttgggcacca
aacttaggacttccgaaatccactattgcaagcgcatcccaggatggcacggttgtcata
tggacagtgggcaaggaaggcgatcaatgggaaggaaaagttttgcatgactttcagact
cctgtatggagagtatcatggtcgctcacaggaaacatattagctgtagccgatggtaac
aataatgtctcattgtggaaggaagccgtcgatgggcaatggcagcaggtgactaccgtc
gaaccataa

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