KEGG   Zingiber officinale (ginger): 122042281
Entry
122042281         CDS       T08725                                 
Name
(RefSeq) proliferating cell nuclear antigen-like isoform X1
  KO
K04802  proliferating cell nuclear antigen
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03030  DNA replication
zof03410  Base excision repair
zof03420  Nucleotide excision repair
zof03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122042281
   03410 Base excision repair
    122042281
   03420 Nucleotide excision repair
    122042281
   03430 Mismatch repair
    122042281
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zof03032]
    122042281
   03400 DNA repair and recombination proteins [BR:zof03400]
    122042281
DNA replication proteins [BR:zof03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    122042281
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     122042281
   MMR (mismatch excision repair)
    Other MMR factors
     122042281
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    122042281
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad9 Ribosomal_L14 RVT_2 GTP-eEF1A_C
Other DBs
NCBI-GeneID: 122042281
NCBI-ProteinID: XP_042458241
LinkDB
Position
2A:127637531..127640968
AA seq 261 aa
MLELRLPQGGLLKKVLEAMRELVTDANFDCSRSGISLQAMDSTHVALVALLLGADSFDHF
RCDRSRSIGMNLNCLAKILRCAANDDVLTLKADDDSDTVVFIFENPKQNKITDFEMKLMD
IQSEHLGIPEAQYQAIIKMSSQEFARICKDLSSIGDTVVISVTKEGVKFSTTGDIGSANI
VCRQNTTVDKPEESMIIEMNDPVSLAFALRYLNSFTKATPLSNSVKICMSSDLPVVVEYK
IADMGYIRYYLAPKIEDDDQT
NT seq 786 nt   +upstreamnt  +downstreamnt
atgttggagctgcggctgccccagggagggctcctgaagaaggttctcgaggcgatgcgg
gagctggtcaccgacgctaacttcgactgctcccgctccggcatctccctccaggccatg
gattccacccacgtcgccctcgtcgccctcctcctcggcgccgactccttcgaccatttc
cgctgcgaccgcagccgatccatcggcatgaacctcaactgcctcgccaagatcctccga
tgcgccgccaacgacgacgtcctcaccctcaaggccgacgacgactccgatactgtcgtt
ttcatcttcgagaaccccaaacagaataaaattacagactttgaaatgaagttgatggac
atccagagtgagcacttaggtattcctgaagcacaatatcaagctattataaagatgtca
tcacaggagtttgcacgaatatgcaaagatctgagttccattggtgacactgttgtaatt
tctgtaactaaggaaggagtgaaattctctactacaggcgacattgggagtgcaaatatt
gtttgccgtcagaacactactgtagataaaccagaggaatccatgataattgaaatgaat
gatccagtttcattggcatttgctcttcgttatctgaattcctttaccaaagcaacacct
ttgtcgaacagtgttaaaatctgcatgtcttcggatcttccggtggtggttgagtataag
attgcagacatggggtatatcagatactacttggctccaaagatagaagatgatgatcag
acctga

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