Zingiber officinale (ginger): 122042294
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Entry
122042294 CDS
T08725
Name
(RefSeq) probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122042294
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122042294
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122042294
03036 Chromosome and associated proteins [BR:
zof03036
]
122042294
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122042294
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122042294
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122042294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_7
EF-hand_1
EF-hand_8
EF-hand_5
EF-hand_13
SPARC_Ca_bdg
Motif
Other DBs
NCBI-GeneID:
122042294
NCBI-ProteinID:
XP_042458262
LinkDB
All DBs
Position
2A:complement(128338706..128359538)
Genome browser
AA seq
481 aa
AA seq
DB search
MYGGASDGEGIGVGHDAGAPKKIPSASSMPWVRNLRRYVGSGAGLGSEALMELETKRILL
EIFKERQKKNAESGSIPSFYKKKPEEGSISHRVQRLAKCRFLKKQSELLLNADDLDAMWV
CLRENCVIDDATGAEKMNYEDFCHIASLCTEQIGAKCRRFFSPSNFMKFEKDEAGRIAIL
PFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMESYIKGLIPNLAQLRDMLEAFIQMY
CRIAARKFFFFCDPHRRGKACIKKVLLSNCLQELMELHQESEEEVPDTEQAENWFSLTSA
QRICDMYIALDKDKNGTLSKQELKEYADATLTEIFIERVFDEHVRRSKAGGVNTREMDFE
SFLDFVLALENKDTPEGLTYLFKCLDLQGRGYLTTADIHMLFRDVHHKWIEGGNYELCIE
DVRDEIWDMVKPADPLRITLADLLTCKQGGTVASMLMDVRGFWAHDNRENLLQEEEEPEE
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcggcgccagcgacggagaaggcatcggcgtcggccacgatgctggtgcgccg
aagaagatcccgtccgcgtcctccatgccgtgggttcgaaaccttcgccggtacgtcgga
tccggcgctggcctcggctctgaagccctcatggagctggaaacaaagaggatattgctg
gagattttcaaagagcgacaaaagaaaaatgctgaatcaggctcaattcctagcttctat
aaaaagaagcctgaagagggatcaatcagtcatagggttcagcgattggcaaaatgtaga
ttcttgaagaagcaatcagaacttttacttaatgctgatgacctggatgccatgtgggtt
tgcttaagggaaaattgtgttattgacgatgcaaccggagctgaaaagatgaactatgaa
gatttctgtcacattgcctctctttgcacggagcaaattggtgctaagtgcagaagattc
tttagcccttcaaacttcatgaagtttgaaaaggatgaagctggcagaattgccatcctg
cctttctatctatatgtgatgcgaacggtttcacttacccaggcaagaattgatatgagt
gagcttgatgaggattctgatggttttcttcaacctcatgaaatggagtcttatataaaa
ggccttattcctaatttggcacaacttcgtgatatgcttgaagcctttattcagatgtat
tgtcgcatagctgcacggaaattcttcttcttttgtgatcctcataggcgaggaaaagca
tgcataaaaaaggtgctgcttagcaattgtctccaggagctcatggaacttcaccaggaa
agtgaagaggaagttcctgacacagagcaggcagaaaattggttttcattaacttctgct
cagaggatatgtgatatgtatattgccctggataaagacaagaatggaactctgagtaag
caagagctcaaagaatatgctgatgcgacactaactgaaatctttattgagagagttttt
gatgagcatgtacgtcgaagcaaagctggaggtgttaatactcgtgagatggactttgaa
agctttctggattttgttttagccctggaaaacaaggacacacctgaaggattaacatac
ttattcaaatgtcttgatcttcaaggacggggctatcttaccactgctgatattcatatg
ctcttcagagatgttcaccacaagtggatcgagggtgggaactacgagttgtgtattgaa
gatgtgagagatgaaatctgggacatggtcaaaccggctgatcctcttaggatcaccctt
gctgaccttctcacctgtaagcaaggtggtacagttgctagcatgctcatggatgtacgc
ggtttttgggcccatgacaacagggaaaacctactccaggaagaagaagaaccagaggaa
gaataa
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