Zingiber officinale (ginger): 122042371
Help
Entry
122042371 CDS
T08725
Name
(RefSeq) cellulose synthase-like protein D1
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zof01003
]
122042371
Glycosyltransferases [BR:
zof01003
]
Polysaccharide
Structural polysaccharide
122042371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_trans_2_3
zf-UDP
Glyco_tranf_2_3
Xin
Motif
Other DBs
NCBI-GeneID:
122042371
NCBI-ProteinID:
XP_042458384
LinkDB
All DBs
Position
2A:complement(134165549..134171324)
Genome browser
AA seq
1179 aa
AA seq
DB search
MMASNGIHRTNRSSRGGGEPQQGSGTELPPIPRAPTVQFGRRTESGRFISFSRDDLESEL
SSSEMGSGRFANYHVHIPMTPDNQPMDPAISSKVEEQYVNSSLFTGGFNSVTRAHVMDKV
LDSAEDGGGQLLGREDSGLTCAVQGCDCMVMRDQHGIVVAPCECDFKICVDCFTDAAKSG
GGICPGCKEPYKTTELGELLSGGGGRLSLPQLPSGGGGPKMERRLSMVKSQKQLAHSQTM
AQGGGDFDHTRWLFETKGTYGYGSAIWSEENYDDVDGGRGGGHGHGHGHPKELMSKPWRP
LTRKLKIPAAVLSPYRLLIVIRMAVLALFLTWRIKHQNEDAIWLWGMSVVCELWFAFSWL
LDQLPKLSPVNRTVDLSVLKEKFETPTAYNPTGKSDLPGIDIFVSTADPDKEPVLVTANT
ILSILAADYPVEKLACYVSDDGGALLTFEAMAEAASFAYLWVPFCRKHNIEPRNPESYFA
SKRDPYKNKVLSDFVKDRRRLKREYDEFKVRINGLPESIRRRSDAFHAREEIKAMNLQRE
KAAGGDEPIEPVKIPKATWMADGTHWPGTWINPSSEHSRGDHAGIIQVMLKPPSDEPLYG
SNDEKLPVDFTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLD
CDHYIYNSQALREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANNNTVFFDVNMRALD
GLQGPVYVGTGCLFRRIALYGFDPPRAKDQHDPGCCSCCFPRRRRKPLRSTAAADADAEE
TRALRMGDYEDGDMNLSTFPKKFGNSSFLIDSIPVAEFQGRPLADHPSIKHGRPPGALTV
PRDLLDASTVAEAISVISCWYEEKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVT
KRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPKMKLLQRVAYLNVGIYPF
TSVFLIVYCFLPALSLFSGEFIVQTLSVTFLTYLLIITLTLCMLAILEIRWSGIELEEWW
RNEQFWLIGGTSAHLVAVMQGLLKVVAGIEISFTLTSKSAGDDEDDEFADLYIVKWTSLL
IPPLAIIMVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRT
PTIVYVWSGLVAITISLLVVAINPPAGASSQIGGSFTFP
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtccaatggcatccaccgcactaaccggtcgagccgcggtgggggcgagccc
cagcagggcagcggcacggaattgccgccgatcccccgagcgccgacggtccagttcggg
cggcggacggagtcgggacgcttcatcagcttctcccgcgacgacctggagagcgagctg
tcgagcagcgagatgggcagcggccgcttcgccaactaccacgtccacatccccatgact
cccgacaaccaacccatggaccccgccatctccagcaaggtggaggagcaatacgtgaac
agctccctcttcaccggcggattcaacagcgtgacccgcgcgcacgtcatggacaaggtg
ctcgactcggccgaagacggcggaggccagctgctgggccgcgaggacagcggcctcacc
tgcgctgttcaagggtgcgactgcatggtgatgcgcgaccagcacggaatcgtggtggcg
ccctgcgagtgcgacttcaagatctgcgtcgattgcttcacggacgccgccaaatcgggg
ggcgggatctgccccgggtgcaaggaaccgtacaaaacgaccgaactgggcgagttgctg
agcggcggcggggggcggctgtcgcttccgcagctgccgagcggtggaggtgggcccaag
atggagcggcggctgtcgatggtgaagtcgcagaagcagcttgcgcactcgcagaccatg
gcgcagggaggaggagacttcgaccacacccggtggctgttcgaaaccaagggaacctac
ggctacggaagtgccatttggtcggaggaaaattacgacgatgtcgatggcggtcgtggt
ggggggcatggccatggccatggccatcccaaggagttgatgagcaagccgtggcgacct
ctcacccgcaaattgaaaatccccgcggccgtcctcagcccatacaggcttctcatcgtc
atccgcatggccgtgcttgctctgttcctgacatggcggatcaagcaccagaacgaggac
gcgatctggctttggggaatgtccgtcgtctgcgagctttggttcgctttctcttggctc
cttgatcagctgcccaagctgtccccggttaaccgcaccgtcgacctctccgtcctcaag
gaaaaattcgagacccccaccgcgtacaatcctaccggcaaatccgacctccccggcatc
gacatcttcgtctccaccgccgatcctgacaaggaacccgtcctcgtcacggccaacacc
atcctctctatcctcgctgctgactaccccgtcgagaagctcgcctgctacgtatccgac
gacggcggcgcgctgctcaccttcgaggccatggcggaggccgccagcttcgcctacctc
tgggtgcccttctgccgcaagcacaacatcgagccgcgcaatcccgagagctacttcgct
tccaagagggatccctacaagaataaggtgctgtcggacttcgtcaaggaccgccgacgg
ctgaagcgggagtacgacgagttcaaggtgaggattaatggtttgccagaatccatccgc
cgccgctccgacgcgttccacgcccgcgaggagatcaaggcgatgaatttgcagagggag
aaagcggctggcggcgacgagccaattgagccagtcaagatccccaaagctacgtggatg
gcagacggcacgcactggccgggcacttggatcaacccatcttcagagcattctcgcggt
gatcacgccggaatcatacaggtgatgctgaaacctccgagcgacgaacctctgtacggc
agcaacgatgagaagctgccagtggacttcacggacgtggacatccgattgccgatgctg
gtgtacgtttcccgtgagaagcgccccggctacgaccacaacaagaaggcaggcgccatg
aacgcgctggtgcgtgcctccgccatcatgtccaacggcccttttatcctcaacctcgac
tgcgatcactacatctacaactcgcaagcgctccgcgagggcatgtgcttcatgatggac
cgcggcggcgaccgcctctgttacgtccagtttccgcagcggtttgagggcattgatccc
tccgaccgctacgccaacaacaacaccgtcttcttcgacgtcaacatgcgggctctcgac
ggcctgcagggccccgtctatgtgggcacaggctgcctctttcgtcgcatcgctctctac
ggattcgaccccccgcgagctaaggaccagcacgaccccggctgctgctcctgctgcttc
ccccgccgccgccgcaagcccctacgatccactgccgccgccgacgccgacgccgaggag
actcgtgctctccgaatgggagactacgaagacggcgacatgaacctctccaccttcccc
aagaagttcggcaactccagcttcctcatagactcgatccccgtggcagagttccagggc
cgccccctcgccgaccacccttccatcaagcacggtcgtccgcctggcgccctcaccgtc
ccccgcgacctcctagacgcctccaccgtcgccgaagctatcagcgttatctcctgctgg
tacgaggagaagaccgagtgggggcagcgcgtcggatggatctacggctccgtcacagag
gatgtcgtcacgggctacaggatgcacaaccgcggctggaagtccgtctactgcgtcacc
aagcgtgacgccttccgcggaacagcgcccatcaacctcaccgaccgcctccaccaggtg
ctccggtgggccaccggctccgtcgagatcttcttctcgaggaacaacgctctgttagcc
agccccaaaatgaaacttttgcagcgcgtggcgtacctcaacgtcggcatctaccccttc
acttccgtcttcctcatcgtctactgctttctcccggcgctgtccctattctccggcgag
ttcatcgtgcagacgctgagcgtcacctttctcacctacttgctgatcatcacattgacg
ctctgcatgcttgcgattttggagatccggtggtcagggatagagctggaggaatggtgg
cgaaacgagcaattctggcttattggcggcaccagcgcgcacctggtggccgtcatgcag
gggctgctcaaggtggtcgccggaatcgagatctccttcacgctgacatccaagtccgcg
ggtgacgacgaggacgacgagttcgcggacctgtatatagtgaagtggacatcgcttctt
atcccacccttggccatcatcatggtgaacctgatcgcaatagcagtgggggtgagcagg
acgatctacagcgagatccctcagtggagcaagctattgggtggcgtcttcttcagcttc
tgggtgctcgcgcatttgtatcccttcgccaagggactgatgggacgtagaggccgaacc
cccaccatcgtctacgtctggtccggcctcgtcgccatcactatctccctgctcgtcgtc
gccatcaacccgcccgccggcgccagctcccaaattggcggctccttcacctttccgtaa
DBGET
integrated database retrieval system
