Zingiber officinale (ginger): 122042452
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Entry
122042452 CDS
T08725
Name
(RefSeq) transcription factor MYB78-like
KO
K09422
transcription factor MYB, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122042452
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
122042452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
HTH_Hrp3
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
122042452
NCBI-ProteinID:
XP_042458521
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Position
2A:complement(141351322..141352579)
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AA seq
248 aa
AA seq
DB search
MTCEVNACGSGTAIGEEEVGLRKGPWSVEEDLLLMNYIADHGEGQWNSLARCAGLKRTGK
SCRLRWLNYLRPDVRRGNITPEEQLLILELHSCWGNRWSKIAQYLPGRTDNEIKNYWRTR
VQKHAKQLRCDVNSKQFEDVIRQLWMPRLAEKIRAATYSSALANATSPTAQESPAEGNLE
PGQATTRPQDSNSSKDSSASLNNCTTAEWSDGWAESLLSGGAYEESTMADMEQSLWSVED
IWLLQELC
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgcgaggtgaatgcttgtggctccgggacagcgatcggcgaggaggaggtgggg
ctgagaaaagggccgtggagtgtggaagaggacttgctgctgatgaattacattgctgat
catggagaaggccaatggaattcattggcccgttgcgcagggctgaaaagaacagggaag
agctgccggctccggtggcttaactatctccgcccggacgtccggcgtggtaacatcact
ccggaagagcaactcctcatcctcgaacttcactcttgttggggaaaccggtggtcgaag
atagcgcagtatttaccagggagaacagacaacgagatcaagaactactggaggacgaga
gtgcagaagcacgcaaagcagctccggtgcgacgtcaacagcaagcagttcgaggacgtg
atacgtcagctgtggatgccccggctggccgagaaaatccgggcggcgacctattcctct
gcgctggcaaacgccacctccccgacggctcaagaatctccggcagagggaaatttagag
ccgggtcaagcaacgactcggccgcaggactccaacagctctaaggactcgtcggcttcc
ttgaataactgcacgacggcggagtggagcgacggctgggcagaatcgcttctaagtggt
ggagcttatgaggaatcgacgatggcggacatggagcagagcttatggagcgtggaggac
atttggttgctgcaagagctttgttaa
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