Zingiber officinale (ginger): 122042485
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Entry
122042485 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122042485
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122042485
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122042485
03036 Chromosome and associated proteins [BR:
zof03036
]
122042485
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122042485
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122042485
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122042485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
COQ7
Motif
Other DBs
NCBI-GeneID:
122042485
NCBI-ProteinID:
XP_042458564
LinkDB
All DBs
Position
2A:complement(143077241..143083825)
Genome browser
AA seq
505 aa
AA seq
DB search
MIKQILNRLPRKPSKSDGRDSVGGPASVSSSSSSSSARSGDLQTSRITHLNSQISGSPPG
SNNLMHPSIVNPRMNGNYIPPVYEALPSFKDVSNTEKQSLLVRKLDLCCVVFDFTDPTKN
LKEKDIKQQTLLELVDYVASTSGKFPETVMQEITKMVSINLFRTLTSPPRESMILEKVDG
DEEEPMMDPAWPHLQIIYEFFLRFVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPRERE
YLKTILHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGVAELLEILGSIVSGFALPLK
EEHKLFLVRALIPLHKPRCMAMYHQQLSYCITQFIEKDCKLSDTVIHGLLKYWPLTNSSK
EVMFLGELEEVLEATQAADFQRCMVPLFQRIARCLSSSHFQVAERALFLWNNDHIETLIK
QNSKVILPVIFPALERNSKSHWNPAVQSLTINVRKIFSDHDPQLVAECLKKFQEDEAQHK
EMISKREATWKRLEDIAASKTSSAA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcagatcctgaaccggctccctcgaaagccatcaaagtctgatggtcgggat
tcagttggtggccctgcttcagtatcatcatcttcttcttcaagtagtgctaggagtgga
gatctacaaacaagtaggatcactcatttgaacagtcagatttctggatcgcctcctgga
tcaaataatctaatgcatccttcaattgttaatccaaggatgaatggaaattacataccc
ccagtctatgaagcattaccgagctttaaagatgtttctaacactgagaaacagagctta
cttgtgagaaaattggacctatgctgtgtcgtttttgattttactgacccaacaaaaaat
ctgaaggagaaagacataaagcaacaaactctactagagcttgttgattatgtagcttct
acaagcgggaagtttcctgagactgtgatgcaagagattacaaagatggtgtccatcaac
ttgttcaggaccttaacttccccacctcgagagagcatgattctagaaaaagttgatgga
gatgaggaagaacctatgatggaccctgcatggccacacttgcaaatcatctatgaattc
tttctacgatttgttgcttctccagagacagatgctaagttggcaaagaggtatatagac
cattcctttgttctcaagctgcttgatctttttgattctgaagacccaagagagagggag
tacctaaagaccatacttcatcgtatatatgggaaatttatggtgcaccgcccatttatt
aggaaggcgattaataacatcttttatcgattcatctttgagacagaaaagcacaatgga
gttgctgagctgttggagattttaggaagtattgtcagtggctttgcattgccactaaag
gaagagcataagttgtttcttgtacgtgcattaatcccacttcacaaaccacgatgcatg
gctatgtatcatcagcagctgtcatattgcataactcaatttattgaaaaggattgcaaa
ctttcagatactgtcatacatgggttgttaaagtactggcctcttacaaatagttcgaaa
gaagtaatgttcctaggggagttagaagaagtcctagaagcaacccaggctgcagatttt
cagagatgtatggttccactgtttcagcggattgctcgctgcttgagtagttctcacttc
caggtggctgaaagagcattgttcctttggaataatgatcatattgaaaccttgatcaaa
cagaatagcaaggttatactacctgtcattttccctgcattggagagaaactcaaagagt
cactggaacccagccgtgcagagcttgacaataaacgttcgcaagattttctctgaccac
gatcctcagctggttgcggagtgtttgaagaaattccaggaagatgaagctcaacacaaa
gaaatgatatccaaacgcgaagcaacatggaagcgtcttgaagacattgctgcttcgaaa
accagcagtgcggcatag
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