Zingiber officinale (ginger): 122042506
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Entry
122042506 CDS
T08725
Name
(RefSeq) probable DNA gyrase subunit A, chloroplastic/mitochondrial
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zof03032
]
122042506
03400 DNA repair and recombination proteins [BR:
zof03400
]
122042506
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
122042506
DNA replication proteins [BR:
zof03032
]
Prokaryotic type
DNA Topoisomerases
122042506
DNA repair and recombination proteins [BR:
zof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
122042506
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
UPF0302
HTH_37
Motif
Other DBs
NCBI-GeneID:
122042506
NCBI-ProteinID:
XP_042458589
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Position
2A:143862490..143915695
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AA seq
940 aa
AA seq
DB search
MAFSTMLRLGSSSVLLARGRPFLFLPAISALLPSSRRVFVELRPLSTASRRAVRPVRAKR
RDREEEPSSAAKQGRGDDGSGPNGGVLVKERSGTREARIVPTELHTEAKESYMAYAMSVL
VGRALPDVRDGLKPVHRRILYAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSL
VRMAQDFSLRCPLINGHGNFGSIDADPAAAMRYTECRLQALTEAMLLTDLDFNTVDFVPN
FDNSQKEPSLLPARLPNLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQEL
LEYMPGPDFPTGGLILGNSGILETYKSGRGRIIVRGKTDVEMLDEKSKRSAIIIKEIPYQ
TNKSALVEKIAELVEQKILDGISDIRDESDRFGMRVVIELKRGSDPSIVLNNLYRHTALQ
SSFSCNMVGILDGQPKLMGLKELLQAFLDFRSSVIERRAAFKLSQALERKHIIEGIIIGL
DNLDDIINIIRKTSSNALAITSLVKGYHLSEKQAEALLDITLRKLTLLERKKFVDEAESL
SDQISNLNELLSSKKLIFQLIEKEAIELKHKFGSPRRSFIEYSGSSQLEEIDVIPNVEML
LTLSEKGYLKRMKPNTFTLQHRGTIGKSVGKMRVNDLMSDFIVCHTHDHILYFSDKGIVY
SARAYKIPECSRTATGTPLVQLLSLSEGERITSIVPVSEFIDDQYLVMLTLNGYIKKVSL
KAFSAIRPSGIIAIQLVAGDELKWVRLCADADLVALASQKGMVIVNFCSKLRALGRKTRG
VISMKLKGDKMASMDVIPASIQKDLQKLSENIYSRGKDLGPPWLLFVSESGHGKRVPLSA
FRLSNFNRVGLLGYKLPPDCRLAAVYVVGFSLSASNEDGESDGQLVLVSQSGTVNRIKVR
DISIQSRASRGVILMRLEYAGKIQSASLISGSADNVGDDD
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggcattctccaccatgctccgcctcggctcttcctccgtccttcttgctcgcggccgg
ccgttcctattcctcccggccatctccgccttgctcccatcttcccgccgcgtcttcgtc
gaacttcgccctctctccactgcgtcgcgccgggccgttcggccggtgagggcgaagcgg
agggatcgagaggaggagccctccagtgcggcgaagcaggggaggggggacgacggcagc
ggacccaatggcggggtgttggtgaaggagcgcagtggcaccagggaggcaaggattgtc
cccacagagctccacacggaggccaaggagtcgtatatggcatatgccatgtcggtgctg
gtcggtcgcgctttgcctgatgtacgggacggtttgaagccggtgcacaggaggatactg
tacgcaatgcatgaattaggtctttcttctcgtaagccttttaagaaatgcgctagggtt
gttggagaggttttaggtaagttccatccccatggagatacagccgtttatgattcttta
gttcgaatggctcaggatttctctctacgatgccctctcattaatggacatggtaacttt
ggatcaatagatgctgatcctgctgctgcaatgagatacacagagtgcagattgcaagct
cttactgaggctatgctcttaacagatttggactttaatactgttgattttgttcccaat
tttgacaactcacaaaaagaaccttctcttttgcctgctcgtctgccaaatctgctgtta
aatggatcttctggaattgcggttggaatggctacaaatataccaccacacaaccttggg
gaacttgtagatgcactttctgttctgatccataatcctgaagctaccctccaagaatta
ctggaatacatgcctggacctgactttcctactggagggctgattttagggaattctggg
atattggaaacatataagtctggacgaggccgcataatagtaagagggaagacagatgtg
gaaatgcttgatgagaaatccaaacgcagtgccataataattaaggagatcccttatcag
acaaataaatctgccctagttgagaaaattgctgaacttgtggaacagaagattttagat
ggtataagcgatattcgtgatgaaagcgaccgctttggaatgcgtgttgtaattgagctg
aaaaggggatcagatccatcaattgttctcaacaacctttatcggcatactgctcttcag
tctagttttagctgcaacatggtaggtattcttgacggtcagccaaaactgatgggtttg
aaggaattacttcaggcgtttcttgattttaggagttctgtcattgaaaggcgtgcagca
tttaagcttagtcaagctctagaacgaaagcatattattgagggcatcattattggtctt
gataacttggatgatattataaacataatcaggaaaacttctagtaacgctctggctatt
acttctttagtgaaagggtaccatttatctgaaaagcaagctgaagctttgttggacatt
actttgaggaaacttacccttcttgagagaaagaagtttgtggatgaagcagaatcatta
tcagatcagatttctaatttaaatgaactcttgtctagtaagaagctcatcttccagctt
atagagaaagaagcaattgagttgaagcataaatttggaagcccaagacgttcatttata
gaatattcagggagtagccaacttgaggaaatagatgttattccgaatgtggagatgctt
ctaacacttagtgagaaaggatatctcaagcgcatgaagccaaacacctttaccctgcaa
catagaggaaccattggaaaatctgttggaaagatgcgggttaatgacttgatgtctgac
ttcatcgtttgtcatacacatgaccacattctttatttcagtgacaagggcatagtttac
tctgctcgagcttataaaataccagaatgttctaggactgcaactggcactccattggtc
cagctgctatccttgtctgaaggggagagaataacctcaattgttcctgtcagtgaattt
attgatgatcaatacctagtaatgttaacactgaatgggtacatcaagaaagtttcttta
aaggccttttcagcaatcagaccttctggaatcattgcaattcagttggtcgctggtgat
gagctgaaatgggttcgtctctgtgcagacgctgaccttgttgctttagcttcccagaaa
ggaatggtcattgtgaatttttgtagcaagcttcgagcacttgggaggaagacaagaggt
gtgatttcaatgaaattaaaaggagacaaaatggcttcaatggatgtcatacctgcgtct
atacagaaagacttgcagaaattgtcagagaatatttacagcagaggtaaagatcttgga
cctccatggctgctttttgtatctgaaagtggtcatgggaagcgtgtacctttaagcgca
ttcaggctatcaaacttcaacagagtgggcttgttaggttacaagcttccaccagattgt
cgtcttgctgcagtctatgtggttgggttttcattgtcagcttccaatgaagatggagaa
agtgatggacaactggttctagttagccaaagtgggacagtaaacagaatcaaagttcga
gatatatccatacagtcacgtgctagcaggggagttatcctaatgagattggaatatgct
ggaaagatccagtctgcatccttgatctctggatctgcagataatgttggcgatgacgat
tga
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