Zingiber officinale (ginger): 122042594
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Entry
122042594 CDS
T08725
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2-like isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122042594
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122042594
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122042594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-ANAPC11
DUF2921
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
zf_RING_Vps8_fungal
NAR2
zf_RING_Vps8
IBR_1
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
122042594
NCBI-ProteinID:
XP_042458705
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All DBs
Position
2A:complement(148107459..148126453)
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AA seq
566 aa
AA seq
DB search
MAGRRREKWFLGDAAAAVGAVAVVLLGLVRPLAALRPLRGMDSAGPWGDERLFLRRRESD
ANPYSSWNITGTYRGRWNFVETTNVSSRLFDFGKSDGVSVLELVSTPTKISGVHYIQGAV
TFYDVFENGHDHGFAKMRVEGVYIWPFRQLRMVASSGADVKSVREEDYFLSNPYYLLGLF
SSQVLQESHQDKVWRRKSLNYDMDKHCNIEIAAQVSRTSSRQSGGRDNEQYHLEGFLESP
KVEDDGECFSPILLNATSLNIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAV
KVSIVMIGQQAILDAYMCLLHLTAGILVESLFNAFATAAFFKFVIFSIFEMRYLLSIWKA
GRPINSGEGWETMRHELSVLYSRFYGILLGGVLFMYELHNFLRPILLVMYSFWIPQIITN
VVRDTRKPLHPHYIIGMTLTRTAIPLYIFGCPNNFLRIQINRSWCVYFLLFMTLQALILL
FQNYFGSRWFIPRQILPEKYNYYRKLGNHSNQAVDCVICMTGIELPQRLNDYMVTPCDHC
FHTGCLQRWMDIKMECPTCRRSLPPA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcggaggagagaaaaatggtttcttggggatgcggcggcggctgtgggtgct
gtggcagtggtgcttctgggtctggttcggcctttggcggcgctgaggcctcttaggggg
atggattctgctggtccttggggtgatgagagacttttcctgagaagacgtgagagcgat
gccaatccttattcatcatggaatattactggaacatacagaggaagatggaattttgta
gagaccaccaatgtctcctctaggctttttgattttgggaaatctgatggtgtatcagtt
ttagagttggtgagtacgcccacaaagataagtggtgtacactacattcagggggcagtt
actttctatgatgtgtttgaaaatggacatgatcatggatttgctaagatgagagtagaa
ggtgtatatatttggccctttagacaacttcgaatggtagctagcagtggagcagatgtt
aagtctgttcgagaagaggattactttttgtccaatccatattacttgcttggtttgttt
tcttcgcaagtgcttcaagaatctcaccaagataaagtatggaggagaaaatctctaaat
tatgacatggacaaacattgtaacatagaaatagctgctcaagtttcacgtacatcatct
cgacaaagtggaggtagagacaatgaacagtaccatttagagggcttcttagagagtcca
aaggttgaagatgatggagagtgcttttcccccattttgttgaatgctacctcattgaac
attgaggtttactacaataaagcagtcaactacacgctgatggtcacctttgtctccttc
cttcaagttcttcttctgatcagacaaatggagcatagcaatacccaatcaggtgctgtg
aaggtttctatcgtaatgatcggacaacaagctatattggatgcatatatgtgtttatta
catttgacagcaggaatcttagttgagtcgctattcaatgcatttgcgacagcggctttc
ttcaagtttgttattttctcgatttttgagatgagatatctcctttccatatggaaggca
ggtagacctatcaacagtggagaaggttgggaaactatgcggcatgagctgtctgttctt
tacagccgtttttatggcattcttttgggaggagttctcttcatgtatgagctgcacaat
ttccttcgtcctattcttttagttatgtactcgttttggatccctcagataatcactaat
gttgttcgggatacaaggaaacccctgcaccctcattacataataggcatgacgctcact
cgtactgcaattccactatacatatttggttgcccgaacaactttctgcgaattcagatc
aaccgaagttggtgtgtatatttcttgttgtttatgacattgcaagcactgatccttctg
tttcagaattattttggatcccggtggtttattccccgtcagatcctaccggagaaatat
aactactaccgaaagctcgggaaccacagtaatcaagcagttgattgtgtgatttgcatg
actggtatcgaacttccacaacgtctgaatgattacatggttacaccatgcgatcactgc
ttccatactggatgcttacagagatggatggacattaagatggaatgcccgacttgccga
cgttccctcccacctgcatga
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