Zingiber officinale (ginger): 122042636
Help
Entry
122042636 CDS
T08725
Name
(RefSeq) ABC transporter G family member 45-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122042636
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122042636
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122042636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
SMC_N
AAA_29
RsgA_GTPase
AAA_16
AAA_22
ABC_trans_N
AAA_18
AAA_33
AAA_30
MMR_HSR1
AAA_25
T2SSE
AAA_23
DO-GTPase1
FtsK_SpoIIIE
Zeta_toxin
NTPase_1
AAA_17
NACHT
Viral_helicase1
AAA_19
Ploopntkinase3
RNA_helicase
ABC2_membrane_3
Motif
Other DBs
NCBI-GeneID:
122042636
NCBI-ProteinID:
XP_042458774
LinkDB
All DBs
Position
2A:149216307..149229374
Genome browser
AA seq
1340 aa
AA seq
DB search
MEESQGFSITCEEHEELVTRLKDWRRRSGIKAPKIEVRFEHLSVETEVHASGRVLPTLPN
VIINTAQELLGWLKVYDTKRRHVKVLSDLKGIVKPSRMTLVLGSPGSGKSTFLRALSGKL
DPSLKVTGKVTYNGQKMNHYISQRMCAYVSQLDAHQAEMTVKETLEFSKKLLNAGDEKEM
LKMSTGETQASIKKETNTYATETEFSKDEGDFVVNYILKVLGLDECANIIIGDQMRRGIS
GGQKKRVTIGEMLVGLAQCFFMDDISTGLDSSTTFRILKFLQQLTHGLDFTMVISLLQPT
QETFDLFDDIILLCEGKIAYQGPREHVLKYFEWMGFKCPDRKNVADFLQEIISKMDQSQY
WTGSKSTYQYISVQKFSECFRSSSFGQQLQEDLQKPFNIDEGDQIIKLNQMYSVPKWEIF
KASFSREKLLMKRNSPFHIFKAIQIILLAFITMTIFLRTTMKHQTVMDGYHYLGAIFGGV
VMVKFNGMTELQIIIRRLPIYYKQREVLFLPGWAFLLPITILSLPASFVEAGLWTSLTYY
VIGFAPSAIRFLQQFLALFCVHQMSMSLFRFIAVIGRTQLMANTLGTATLVAVYILGGFV
ISKDAIQSWLVWGYWLSPLTYGQNAVAINEFLDQRWSTKIDNGGSNEDTVGKTILRQRGM
LTEWHWYWYSVAILLAFALVFNILSIVALEYLRAPLRSRSNIRMAPTDFKKVNADDAQEL
TAEATHQRRMSLPFQPLTVAFKNINYYVDMPKQLKQAGVKQDKLQLLRQVSGVFRPGVLT
ALMGVTGAGKTTLLDVLAGRKTAGYIEGSIKISGYPKKQETFARISGYCEQSDTHSPCLT
VLESLWYSARLRLPSDIDTYTRSLFIDEVMELVELKELKNAMVGLPGVNGLAAEERKRLT
IAVELVSSPSIIFMDEPTTGLDARAAAIVMRTVRKAADTGRTIVCTIHQPSIEIFEAFDE
LLLMKRGGQLIYSGPLGNLSKNMRQYFEAIPGVPMIIDGQNPATWMLNVTSPAMEYKLGI
DFGTIYRNSSLHKDNINLVDELSERQTNTEDLHFKSKYTQSFSSQCISCLWKQHRSYWKN
PEHNVVRFIITFSVSLLFGLVFFKIGSRRDTQQDIFNILGAMYGSALFIGFANASVVQPI
VERERIVFYREKAAGMYSSLPYAIAQVAIEIPYVVSQALIFSAIVYPMIGFPFTVANFSW
FILFLVLSFIYFVLFGMMTISLTPNQEIAALLSFFLFVTWNIFSGFFIPQKMIPIWWRWY
YWANPAAWTVYGLMVTQLGDGDDSLEIMGGIKMMVKEFLKQYFGVQESYLPLIVSLHFAI
IVLFMFVFGFSIKYLNFQRR
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatcacaaggcttttcgattacctgtgaggagcatgaagagctcgtaaccagg
ttgaaggattggagaagaaggtcggggatcaaagctccaaagattgaagtcaggttcgag
catttgtcagtggagaccgaggtccatgcttcggggagagttcttcccacccttccgaat
gtcatcatcaacactgctcaggaacttctgggatggctaaaagtgtatgatacaaaaagg
aggcatgtcaaagtgctgagtgatttgaaaggaattgtaaagccatctaggatgacactt
gtgttaggatctccaggttcgggaaagtcaacgtttttgagagcactttctgggaaacta
gatcctagtttaaaagtcacagggaaagtcacatacaatgggcaaaagatgaaccactac
atctcacaaaggatgtgtgcatatgttagccaacttgacgcccatcaagctgagatgaca
gtgaaggagaccctggagttctctaagaagctgttaaatgccggagatgaaaaagagatg
cttaaaatgagcacaggagagacacaagcaagcatcaaaaaagagacaaatacctatgcc
acggaaactgagttttcaaaagatgaaggggatttcgtagtcaactacattctgaaggta
cttggcttggatgagtgtgcaaacataataataggtgatcagatgagaaggggaatatcc
ggaggacaaaagaaaagagtcactattggtgaaatgctagtaggactagcacaatgtttt
ttcatggatgacatttccacagggcttgatagctccactacctttcgtattctcaagttt
ctgcagcagcttacacatggtttggatttcaccatggttatatctttgcttcagcctact
caagagacatttgatctatttgatgacataatccttttatgtgagggaaaaattgcttac
caaggaccaagagaacatgtccttaaatattttgaatggatgggcttcaaatgtcctgac
agaaagaacgttgcagacttcctgcaagagataatatcaaagatggatcaatcacaatac
tggacaggtagcaaaagtacttatcagtacatatccgtacaaaaattttcagaatgcttc
agatcttccagctttggccagcaactccaagaagacttgcaaaagccatttaacattgac
gagggtgatcaaattatcaaactaaaccagatgtatagcgtcccaaagtgggagatattc
aaggccagcttctcaagggaaaagctactaatgaaaagaaattctccatttcacatattc
aaggccatacaaatcatcttgctggcatttatcactatgacaattttcctccgaacaaca
atgaaacatcagacagtaatggatggttatcattatctcggagcaatatttggtggagtg
gtgatggtaaaattcaatggtatgacagaattgcaaattatcatcagaagacttcctatc
tattacaagcagagggaagtactatttctgccaggatgggctttccttttacctattaca
atcctcagcctcccagcctcatttgttgaagcaggtctatggacaagtctgacatactat
gtaattggctttgcaccatcagcaattagattcttgcaacagttcttggcattattttgt
gtgcatcagatgtcgatgtcacttttccgctttatagcggttatcggaagaacacagctg
atggctaacacactagggacagccactttagtggctgtctacattctaggaggttttgtc
atatccaaagatgctattcaatcatggttggtctggggctattggttatcacctttgaca
tatggtcagaatgctgtagcaatcaatgaatttcttgatcaaagatggagtacgaaaatt
gacaatggaggaagcaacgaggatacagttggaaagaccattctgagacaaagagggatg
ttaacagagtggcactggtactggtactctgtagcgatattgcttgcatttgctctggtt
ttcaacattctcagcattgttgcacttgaatacctacgagctccattgagaagtcgatcc
aacatacgtatggcgcctacagatttcaagaaggttaatgcagatgacgcccaagaatta
acagctgaagcaacacaccagagaaggatgtctctaccatttcaacctctgaccgtagca
ttcaaaaatattaattattatgtagacatgcctaagcaactgaagcaagctggagtgaag
caggataagcttcagttgctacggcaagtctctggagtcttcaggcctggagtactaact
gcactaatgggagtgacaggtgctggaaagactacattactagatgttttagcaggaaga
aaaacagcagggtacattgaaggaagcatcaagatatcaggatatcctaaaaagcaggaa
acatttgccaggatttcaggatattgtgaacaatcagatactcactctccttgtctaacc
gttctagaatctttatggtactcagcacggcttcgtcttccatcagacatagacacatac
acaagaagtctattcatagatgaagttatggaactggttgagctaaaggaactgaagaat
gcaatggtaggtttaccaggagtaaatggccttgccgcagaagagcgcaaacgtctaaca
attgcagtggagttagtttcaagcccttctatcatattcatggatgaacccacaacaggt
ttagatgctagagctgcagcaattgtcatgagaacagttagaaaggcagctgacactggg
cgaacaattgtctgcacaatccatcaaccaagcattgagatatttgaagcttttgatgag
ttacttctaatgaaaagaggagggcagcttatatacagtggacctttgggaaatttatcg
aagaacatgagacaatactttgaagctattccaggagtacccatgattatagatggtcaa
aatcctgcaacatggatgttaaatgtcacttctcctgccatggagtataagcttggcata
gattttggaactatatatcgcaattcatcacttcacaaagacaacattaacctggttgat
gagttgagtgaaagacagactaacacagaagaccttcacttcaaatccaaatatacacaa
agtttttcatctcagtgtatatcctgcctgtggaaacaacatagatcttactggaagaat
ccagagcataatgtagttcgtttcatcatcacattctcagtatcacttctatttggttta
gtattctttaaaattggctctagaagagacacacagcaagatattttcaacattctagga
gcaatgtatggttcagcactgtttattgggttcgcaaatgctagtgtagtacagcctatt
gtggaaagggagaggattgtattttaccgtgaaaaggcagctgggatgtattcttctttg
ccatatgccatagctcaggtggccattgagattccttacgttgtgagccaagctttaatt
ttctcagccattgtttatccaatgattggattcccatttacagtggcaaacttctcctgg
ttcattctgttcttggtcttgagttttatctattttgttctctttggaatgatgacaatc
tcactaacaccaaaccaagaaatagcagcgcttctctcttttttcctctttgttacgtgg
aatatcttctccggattcttcattcctcaaaagatgataccaatttggtggagatggtat
tattgggctaatcctgctgcatggactgtttatggtctaatggttacacagctaggtgac
ggtgatgatagtttggaaattatgggcgggatcaagatgatggtgaaggagtttctcaag
caatattttggggtacaagagagctatcttccactcattgtgtccctacactttgcaata
attgtgttatttatgtttgtatttgggttcagcatcaagtatctgaattttcagagaaga
tag
DBGET
integrated database retrieval system
