Zingiber officinale (ginger): 122042680
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Entry
122042680 CDS
T08725
Name
(RefSeq) prolycopene isomerase 1, chloroplastic-like
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00906
Carotenoid biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
122042680
Enzymes [BR:
zof01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
122042680
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
Thi4
GDI
GIDA
HI0933_like
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
Pyr_redox_3
MCRA
Motif
Other DBs
NCBI-GeneID:
122042680
NCBI-ProteinID:
XP_042458860
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Position
2A:complement(150723223..150729769)
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AA seq
596 aa
AA seq
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MLRLAPPLLVAATCPAVDTDGFPLRRRILALPPLASRRSSSRALRSASGILRMPPVAVLS
PERAIRRGASEKGEAGEEYDAIVIGSGIGGLVAATQLAAKGARVLVLEKYVIPGGSSGYY
ERDEFTFDVGSSVMFGFSDKGNLNLITRALAAVGHKMQVIPDPTTVHFHLPGELSVRVHR
EYNDFIEELISKFPHEKAGINQFYDECWKIFNALNSLELKSLEEPIYLFGQFFKKPVECL
TLAYYLPQNAGDIARKYIKDSQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGIN
YPVGGVGGIARALADGLVTKGSNILYKANVTNIILKDGKAVGVRLSDGREFFATTVISNA
TRWDTFGKLVKTDEIPEEEKNFQRVYVKAPSFLSIHMGVKATVLPPETDCHHFILEDDWA
NLERSYGSIFLSIPTVLDSSLAPEGHHILHIFTTSSMDDWKGLNSKDYEKKKELVADEII
SRLENKLFPGLKSSIVLKEVGTPKTHRRFLARDSGTYGPMPRQIPKGLLGMPFNTTAIDG
LYCVGDSCFPGQGVIAVAFSGIMCAHRVAADIGLEKRSPVLDAALLRLLGWLRTLA
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgctccgtttggccccgccgctgcttgtcgcagccacctgtccggccgtcgacaccgat
gggttccccctccggaggcgaattctagctttgccccctttagcatctaggcggagctca
agccgggccttgaggtcagcgtccgggatccttcggatgcccccagtcgccgtcctgagc
cccgagagggcgatccggagaggtgcgagcgagaagggagaggcgggagaggagtacgac
gcgattgtgatcgggtccgggatcggcgggctcgtggcggcgacgcagctggcggccaag
ggagctagggttctggttctggagaagtatgtcatccctgggggaagctctgggtactac
gagagggatgagtttactttcgacgtcggttcgtccgtgatgtttggttttagcgataag
ggcaacctgaacctaatcacacgagcattagcagcagttggtcataagatgcaggtcata
cctgatcctaccaccgttcacttccaccttcctggtgaactgtctgttcgtgtgcatcgt
gagtataatgacttcattgaggaactaatcagtaaattcccgcatgaaaaagcgggaata
aatcagttttacgatgagtgctggaagatattcaatgcactgaattcattggaactgaag
tcactggaagagcctatatatctctttggacagttcttcaagaagccagtcgaatgcttg
actcttgcttattacttgccacaaaatgcgggggatattgctcggaaatatataaaggat
tctcagttattatcattcattgacgctgagtgtttcattgtgagtacagtaaatgcattg
cagacaccaatgatcaatgccagcatggtcttgtgcgacagacactttggagggattaat
tatccagttggcggtgttggtggtattgctagggctttggcagatgggctagttactaag
ggaagcaacatactttacaaggcaaatgtgaccaatataatactgaaagatggaaaggct
gtgggagtgaggctctcagatggaagggaatttttcgctactacagttatctcaaatgca
acaagatgggataccttcggtaaacttgtgaaaacggatgaaataccggaagaggagaaa
aactttcaaagagtttatgtcaaggcaccgtcttttctttccattcacatgggagtcaaa
gctacagttttgcctcctgaaacagattgccatcatttcattcttgaggatgattgggca
aatttagagaggtcttatggaagcatatttttgagcattcctactgttcttgattcatct
ttggccccagagggacatcacattctccacatttttaccacatcttccatggatgactgg
aagggcctcaattcaaaggactatgaaaagaaaaaagaacttgtggctgatgaaattata
tcaaggcttgaaaataaactcttccctggtctcaaaagctctatagtgcttaaagaggtg
ggtactccaaagacccacagaagatttcttgctcgagacagtggtacatatgggccaatg
ccacgccagattccaaaaggattacttgggatgcccttcaacactactgcaatcgacggt
ctatactgtgttggcgatagctgttttcctggacaaggagttatcgctgttgccttttct
ggaatcatgtgtgctcacagagttgctgctgatataggtcttgagaaaagatctccagtg
ctggatgctgctcttcttcgcttacttggctggttgaggacactggcttga
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