Zingiber officinale (ginger): 122042690
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Entry
122042690 CDS
T08725
Name
(RefSeq) serine/arginine-rich splicing factor RSZ21A-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122042690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122042690
Spliceosome [BR:
zof03041
]
Common components
Common spliceosomal components
SR proteins
122042690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_7
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
122042690
NCBI-ProteinID:
XP_042458876
LinkDB
All DBs
Position
2A:150824248..150830038
Genome browser
AA seq
235 aa
AA seq
DB search
MSRVYVGNLDSKVTERVLEDEFRTFGVLRSVWVARRPPGYGFVEFDDRRDALDAIHDLDG
KHGWRVELSRNSKGEGGGRDRRGQGSGGDMNCYECGEPGHFARECRLRIGSGGLGSGRRR
SPSPPRYRRSPSYGRSRSRSPRGGRSPRRRSYSPRSRSPARRRDSPYANRSQSPRGRRSP
RRSNSRSRSPVHRQDGSPFDNRSPGPEKNYSPSRANGHEESLNVNGDGQRSRSKS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggtttatgttgggaatttggactcaaaagtcacagaaagagttctggaagat
gaattccgaacatttggtgttcttcgaagtgtttgggttgctcgaaggccacctggttat
ggctttgttgaatttgatgatcgaagagatgcattagatgccattcatgatttagatggg
aaacatgggtggcgtgtggagctttctcgtaattcaaaaggtgaaggtggtggacgtgat
aggcgtggacaaggtagtggtggggacatgaattgttatgaatgtggtgaacctggtcat
tttgcccgagagtgtagattacgcattggatcaggtggtttaggaagtggaaggcggaga
agccctagtccacctcgctatcgccgtagccctagctacggtcgaagcagaagtcgaagc
ccgcgagggggaagatctcctcgtcgtcgcagctattcacctaggagtaggtcaccagca
cgtcgtagagattctccttatgctaatagaagtcaaagcccacgagggagaagatctcct
cgtcgcagcaattcgcggagtagatccccagtgcatcgacaagatggttctccttttgat
aatagaagtcctggccctgagaagaactacagtccttcacgggcaaatggtcatgaagaa
tctcttaatgtcaacggggacgggcaacggagcaggagcaaaagctaa
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