Zingiber officinale (ginger): 122042861
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Entry
122042861 CDS
T08725
Name
(RefSeq) homeobox-leucine zipper protein ROC2-like
KO
K09338
homeobox-leucine zipper protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122042861
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
122042861
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
DciA_cyano_C
MRP-L20
Motif
Other DBs
NCBI-GeneID:
122042861
NCBI-ProteinID:
XP_042459145
LinkDB
All DBs
Position
2A:156255106..156259476
Genome browser
AA seq
782 aa
AA seq
DB search
MPVGIMIPARQAAASMMGRNAGTSFGSSSVLSLSQPNLLEGELQIPPLQYQHGNQFVDMA
PTTMTGESEMARAEADFESKSGGSENIEGASGDDQDQNTRPRKKRYHRHTQHQIQEMEAF
FKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSGLRAENEKLRAEN
MRYKEALSNASCPNCGGPAALGEMSFDEHHLRIENARLHEEIDRISGIAAKYVGKPMSIG
AAASYPLLSPTSSRSPLDLGYGVGEVFGAAGAVGELLRSVPAGGQSEIMDKPVVVELAVA
AMEELIRMAQLNEPLWLFPDGMNSCGEALNEEEYAQVFPRGIGPKPFGLKSEASRETAVV
IMNQMNVVEMFMDVNQWSNVFAGIVSKAMTIEVLSTGVAGNYNGALQVMSAEFQVPSPLV
PTRESLFVRYCKQHPDGTWAVVDVSLDSLRPSPVSKCRRRPSGCLIQEMPNGYSKVTWVE
HVEVDDRSVHNIYKPLVNSGLAFGAKRWVSTLDRQCERLASVMASNIPTTEIGVITSAGG
RKSMLKLAERMVMSFCGGVSASTTHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAA
TSFWLPVPPKRVFDFLRDETTRSEWDILSNGGVVQEMAHIANGQDQGNCVSLLRVNSSNS
NQSNMLILQESCTDVTGSYVIYAPVDVMAMNVVLNGGDPDYVALLPSGFAILPDGPASAG
AAGAVVEEVGSGGSLLTVAFQILVDSTPTAKLSLGSVATVNSLIACTVERIKASVAGEII
HH
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgggaatcatgataccagcgagacaagcagcagcttccatgatggggaggaac
gcaggcacaagctttggctcctcctcagtcttgtccctcagccagccgaatttgttagaa
ggggaactgcagatcccgccgctgcagtaccagcacgggaaccagttcgtggatatggcg
ccaacgacgatgacgggggagagcgagatggcgcgggcggaggccgacttcgagagcaaa
tccggcggcagcgagaacatagagggcgcctccggcgacgaccaggatcagaacacgcgg
ccccgcaagaaacgctaccaccgacacacccagcatcagatccaggagatggaagcattc
ttcaaggaatgccctcacccagatgacaagcagagaaaggagctgagtagagagcttggg
ctcgagcctctccaagtcaagttctggttccagaacaagcgcactcaaatgaagaatcaa
catgagcggcatgagaacagcgggctgcgtgcggagaatgaaaagctgcgcgccgagaac
atgaggtacaaggaggccctcagcaacgcctcctgccctaactgcggtggcccagccgcc
ctcggcgagatgtccttcgacgaacaccacctccgcatcgaaaacgctcgtcttcatgaa
gaaattgataggatatcggggatcgccgccaagtacgtcggcaaaccgatgtcaataggc
gcagcggcgtcgtatcctctgctttctccgacgtcctcacggtcgcctttggatctaggg
tacggtgtcggagaagttttcggggctgcaggggcagtcggggagctgcttcgtagcgtg
ccggcaggaggacagagtgagataatggataagccggtggtggtggagctggcggtggcg
gcgatggaggagctcatccggatggctcagctcaacgagccgctgtggttgtttccggac
ggcatgaattcttgcggggaggcgctgaacgaggaggagtatgctcaggtgttcccgaga
ggaatcggaccgaagccgttcgggctcaagtcggaggcgtcgcgggagacggcggtggtg
atcatgaaccagatgaacgtggtagagatgttcatggatgtgaaccaatggtcaaatgtg
tttgcggggattgtgtcgaaggctatgacaatcgaagtgctatcaactggagtggcaggc
aattacaatggagctttgcaagtgatgtcagccgagttccaagtcccttctccacttgtg
cccacaagggagagcctcttcgtgagatactgcaagcagcatcctgacgggacttgggcc
gtggtcgatgtttccctggacagcctacggcccagcccggtttctaagtgccggagaagg
ccctcaggctgcttgatccaagagatgcccaacggctactctaaggtgacttgggtggag
cacgtggaggtggacgaccggtcggtccataacatttacaagcctctggttaactcgggt
ttggcgttcggcgcgaagagatgggtcagcactttggaccgccaatgcgagcggcttgcc
agcgtcatggctagcaacatccccactactgagatcggtgtgataacgagcgccggagga
cggaagagcatgttgaagctggcggagcggatggtgatgagcttctgcggcggcgtgagc
gcgtcgacgacgcaccagtggacgacgttgtcggggagcggggcggaggacgtgcgcgta
atgacgaggaaaagcgtggacgaccccggcaggccgccgggcatcgtcctcaacgccgcc
acctccttctggctccccgtccctcccaaacgcgtcttcgacttcctccgcgacgaaacc
acccgcagcgagtgggatatactctccaatggcggagttgttcaggaaatggctcacatc
gccaatggccaggatcaaggcaactgcgtctctcttctccgggtcaatagctcgaactcg
aaccagagcaacatgctgatactgcaggaaagctgcaccgatgtgacaggatcttacgtc
atttacgcccctgtcgacgtcatggccatgaacgtcgtcctcaacggcggcgaccccgat
tacgtggccctcctcccctctggcttcgccatcctgcccgacggcccagcctccgccgga
gcagctggcgccgtggtcgaggaggtgggctccggcggctccctcctcaccgtcgccttc
cagatcctcgtcgactccacccccaccgccaagctctccctcggctccgtcgccaccgtc
aacagtctcatcgcctgcaccgtcgaacgcatcaaggcgtccgtcgccggcgagatcatc
caccactaa
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