KEGG   Zingiber officinale (ginger): 122042940
Entry
122042940         CDS       T08725                                 
Name
(RefSeq) SEC12-like protein 1 isoform X1
  KO
K14003  prolactin regulatory element-binding protein
Organism
zof  Zingiber officinale (ginger)
Pathway
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122042940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122042940
Membrane trafficking [BR:zof04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    122042940
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WD40_Prp19 WD40 WDR55 Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_CDC20-Fz NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 122042940
NCBI-ProteinID: XP_042459273
LinkDB
Position
2A:complement(161067746..161077605)
AA seq 383 aa
MEGDDTAGPATCAAWIRGPDKRLLVVMGRARNRSCPPVIDILEFDAETASLSSDPLARLV
IGDEEGGDPLGFAVHPSGDEFVCSTVSGCRLYDLDYHNWSIKMAKDLPAIQSIGTQKCLA
FSTDGLKFAVGGEDGHLRIFHWPTLNLLLDEPKAHKSFRDMDISLDSEFLVSTSTDGAAR
IWKITEGAPLVSLTRTADEKIECCRFSRDGTKPFLFCTVQKGSKVVTTVWDMSTWNRIGY
KKLIGKPISVLSISLDGKYLGLGTKDGDMCVVEVKTMSISHLSKKLHLGTPITLLEFAPK
GRVVISTSTQWGFKLTKLNVPADWKEWQIYLVLVGLFLASLVLFYIFYETSDSFWNFPLG
KNQPGRFPTAAFTDPQPSEDGPW
NT seq 1152 nt   +upstreamnt  +downstreamnt
atggagggcgacgacacggcagggccggcgacgtgcgcggcgtggatccggggaccggat
aagcggctgctggtggtgatggggagggcgaggaaccgctcctgccctcccgtgatcgac
atcctcgagttcgacgccgagaccgcttccctctccagcgatcccctggcgaggctcgtg
atcggggatgaggagggaggcgatccactggggttcgcggtgcaccctagcggggatgag
ttcgtttgctccactgtcagcggctgcagattgtatgacttagattatcacaattggagt
ataaaaatggccaaagatcttcctgctatccagtccattggcactcagaaatgtttggcg
tttagtacggatggtctgaaatttgctgttggtggagaagatggacatcttagaatattt
cattggccaaccttgaatttgctcttggatgagccaaaagctcataaatcttttagagat
atggatatcagcttggattccgaattcttagtttcgacatctactgatggcgctgcaaga
atatggaagataactgaaggtgctccacttgtctcattgactcgcactgcagatgagaag
attgagtgttgccgattttctagagatggaaccaaacctttcctattttgcactgtccag
aaaggtagtaaagtggtaactacagtgtgggatatgagtacatggaacagaattggctat
aagaagctgataggaaagcctatttctgttctttcaattagcttggatgggaaatacctt
ggacttggaaccaaagatggtgatatgtgcgtagttgaagtaaagacaatgtcaatctct
cacttgagtaagaagcttcatcttggcactcccattacgttgctggaatttgctcccaaa
ggaagggttgttatttctacttcaacccaatgggggttcaagcttaccaaactcaatgtg
cctgcagattggaaggagtggcaaatctacttggtattagtgggcctctttcttgcttcg
ctagttttgttttatatattttatgagacttctgattcattctggaacttccctcttgga
aaaaaccaacctggaagatttccaaccgcagccttcaccgatcctcaaccttcagaagat
ggtccttggtga

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