Zingiber officinale (ginger): 122042940
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Entry
122042940 CDS
T08725
Name
(RefSeq) SEC12-like protein 1 isoform X1
KO
K14003
prolactin regulatory element-binding protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122042940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122042940
Membrane trafficking [BR:
zof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122042940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WD40_Prp19
WD40
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_CDC20-Fz
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
122042940
NCBI-ProteinID:
XP_042459273
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Position
2A:complement(161067746..161077605)
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AA seq
383 aa
AA seq
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MEGDDTAGPATCAAWIRGPDKRLLVVMGRARNRSCPPVIDILEFDAETASLSSDPLARLV
IGDEEGGDPLGFAVHPSGDEFVCSTVSGCRLYDLDYHNWSIKMAKDLPAIQSIGTQKCLA
FSTDGLKFAVGGEDGHLRIFHWPTLNLLLDEPKAHKSFRDMDISLDSEFLVSTSTDGAAR
IWKITEGAPLVSLTRTADEKIECCRFSRDGTKPFLFCTVQKGSKVVTTVWDMSTWNRIGY
KKLIGKPISVLSISLDGKYLGLGTKDGDMCVVEVKTMSISHLSKKLHLGTPITLLEFAPK
GRVVISTSTQWGFKLTKLNVPADWKEWQIYLVLVGLFLASLVLFYIFYETSDSFWNFPLG
KNQPGRFPTAAFTDPQPSEDGPW
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgacgacacggcagggccggcgacgtgcgcggcgtggatccggggaccggat
aagcggctgctggtggtgatggggagggcgaggaaccgctcctgccctcccgtgatcgac
atcctcgagttcgacgccgagaccgcttccctctccagcgatcccctggcgaggctcgtg
atcggggatgaggagggaggcgatccactggggttcgcggtgcaccctagcggggatgag
ttcgtttgctccactgtcagcggctgcagattgtatgacttagattatcacaattggagt
ataaaaatggccaaagatcttcctgctatccagtccattggcactcagaaatgtttggcg
tttagtacggatggtctgaaatttgctgttggtggagaagatggacatcttagaatattt
cattggccaaccttgaatttgctcttggatgagccaaaagctcataaatcttttagagat
atggatatcagcttggattccgaattcttagtttcgacatctactgatggcgctgcaaga
atatggaagataactgaaggtgctccacttgtctcattgactcgcactgcagatgagaag
attgagtgttgccgattttctagagatggaaccaaacctttcctattttgcactgtccag
aaaggtagtaaagtggtaactacagtgtgggatatgagtacatggaacagaattggctat
aagaagctgataggaaagcctatttctgttctttcaattagcttggatgggaaatacctt
ggacttggaaccaaagatggtgatatgtgcgtagttgaagtaaagacaatgtcaatctct
cacttgagtaagaagcttcatcttggcactcccattacgttgctggaatttgctcccaaa
ggaagggttgttatttctacttcaacccaatgggggttcaagcttaccaaactcaatgtg
cctgcagattggaaggagtggcaaatctacttggtattagtgggcctctttcttgcttcg
ctagttttgttttatatattttatgagacttctgattcattctggaacttccctcttgga
aaaaaccaacctggaagatttccaaccgcagccttcaccgatcctcaaccttcagaagat
ggtccttggtga
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integrated database retrieval system