Zingiber officinale (ginger): 122042975
Help
Entry
122042975 CDS
T08725
Name
(RefSeq) 26S proteasome regulatory subunit 8 homolog A-like
KO
K03066
26S proteasome regulatory subunit T6
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
122042975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
zof03051
]
122042975
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
122042975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_lid_PRS2_C
AAA_5
AAA_2
AAA_16
nSTAND3
AAA_22
RuvB_N
PRS7_OB
TIP49
AAA_28
AAA_33
AAA_24
NPHP3_N
AAA_3
PhoH
AAA_14
Mg_chelatase
OapC
Parvo_NS1
ATPase
ABC_tran
RNA_helicase
AAA_17
AAA_19
IstB_IS21
DUF815
AAA_18
AAA_7
DUF5906
AAA_11
AAA_25
TsaE
Sigma54_activat
bpMoxR
Zeta_toxin
RsgA_GTPase
DUF4763
Motif
Other DBs
NCBI-GeneID:
122042975
NCBI-ProteinID:
XP_042459322
LinkDB
All DBs
Position
2A:163360402..163365694
Genome browser
AA seq
422 aa
AA seq
DB search
MACAAVEKKQSAEVEVEEEMCAPVAKVRGGGGEGLRQYYVQHIHDIQLHLRQKTNNLQRL
EAQRNDQNSRVRMLREELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKSIDI
TKLTPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVI
ELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG
EGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDGFE
ASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDL
KKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKL
WK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtgcagcggtggagaaaaagcaatcggccgaggtagaggtggaggaagagatg
tgcgcgccggtggcgaaggtcagagggggcggaggcgaggggctgcggcagtactacgtg
cagcacatccatgatatccagctccatctcaggcagaagacgaacaatctccagcgcctc
gaggcccagaggaacgatcaaaactctcgagtcagaatgctccgagaagagttgcagctg
cttcaggagcctggttcgtatgttggagaggtggtgaaagttatggggaaatcgaaggtc
cttgtcaaggttcatccagaaggaaaatatgttgttgatattgataagagcattgacatc
actaagctaacaccatcaaccagagttgctcttcgcaatgacagttatgtccttcatctt
atcctacccagcaaagtagaccctctagtaaatctgatgaaagttgaaaaagttcctgat
tcaacttatgacatgattggtggtcttgatcagcaaatcaaagagattaaggaggttatt
gagcttccaatcaagcatcctgaactgtttgaaagccttggaattgctcaaccaaagggt
gtcttgctttacggcccacctggcacagggaaaactttattggcaagggccgttgctcat
catactgattgcaccttcattagggtttctggttctgagttggtccagaaatacattgga
gaaggctctagaatggttcgggaactgtttgttatggctagggaacatgctccatcaatt
atattcatggacgaaatagacagtattggatccgctagaatggagtcgggcaccggtaat
ggtgacagtgaagtacagcggacaatgcttgagctgcttaaccagcttgatgggtttgag
gcatcaaacaaaattaaggttctaatggccactaacaggatcgacattctagaccaagca
ctcctcagacctggtagaattgacagaaaaatcgagttcccaaatcccaacgaagagtcc
cgctttgatatcttaaagattcattcgcggaagatgaacttgatgcgcggcatagatctt
aaaaagattgcggaaaagatgaatggagcgtctggtgcagaactgaaggctgtgtgcaca
gaagcagggatgtttgcactcagggaacgaagagtccatgttacacaggaggattttgag
atggcagttgctaaagtcatgaaaaaagacactgagaagaacatgtccctccgaaaatta
tggaagtag
DBGET
integrated database retrieval system
