Zingiber officinale (ginger): 122043018
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Entry
122043018 CDS
T08725
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122043018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122043018
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
122043018
Prokaryotic type
Archaeal type
TFB
122043018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
RB_B
Zn_ribbon_8
TPR_NPHP3
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
122043018
NCBI-ProteinID:
XP_042459387
LinkDB
All DBs
Position
2A:complement(164657565..164666003)
Genome browser
AA seq
312 aa
AA seq
DB search
MGDAYCSDCKKSTEVVFDHSAGDTVCSECGLVLEAHSIDETSEWRTFANESGDNDPVRVG
GPSNPLLADGGLSTVISKPNGAQGDFLSSSLGRWQNRGSNPDRTLILAFKTIATMADRLG
LVATIKDRANEIYKKVEDLKSVKGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVKAAQEAVQKSEEL
DIRRSPISVAAAIIYMITQLSDEKKPLKDISLATGVAEGTIKNSYKDLYPYASRIIPTFY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgcctactgctctgactgcaagaagagcacggaggtggtgttcgaccactcg
gcgggggacaccgtgtgctccgagtgcgggctggtgctggaggcgcactccatagacgag
acctccgagtggaggacgttcgcgaacgagtcgggggacaacgacccggtccgcgtcggc
ggccccagcaatcccctcctcgcggacggcggactctccaccgtcatctccaagcccaac
ggcgcgcagggggatttcctctcgtcttcgctgggccggtggcagaaccgtggatccaac
cccgaccggaccctcatcctcgccttcaagaccatcgccaccatggccgataggttgggt
cttgtcgccactataaaggaccgagccaatgaaatatataagaaggtggaagatttgaag
tctgtcaagggacgaaatcaagatgcaattttagctgcttgtctatacattgcttgccgc
caggaggacaaacctcgaactgtcaaagagatttgttcggttgctaatggagctacaaag
aaggaaataggtcgggccaaagagttcattgttaaacaacttgaagttgagatgggacaa
tctatggagatgggcacaattcatgctggagatttcttgagacgattctgttcacatctt
ggcatgacaaatcaagcagttaaagcagctcaggaagcagttcaaaaatcagaggaactt
gacataaggaggagtcccatttcagttgcagcagctattatttacatgataactcagcta
tctgatgaaaaaaaacccctcaaagacatatcgcttgcaactggggttgcagaaggcacc
ataaagaactcgtacaaagatctctatccttatgcttccaggatcatccctaccttctat
gccaaggaagaggatctaaagaacctctgcagcccataa
DBGET
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