Zingiber officinale (ginger): 122043187
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Entry
122043187 CDS
T08725
Name
(RefSeq) WASH complex subunit 4-like isoform X1
KO
K18465
WASH complex subunit 7
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122043187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122043187
Membrane trafficking [BR:
zof04131
]
Protein recycling
Others
WASH complex
122043187
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WASH-7_mid
WASH-4_N
WASH-7_C
Motif
Other DBs
NCBI-GeneID:
122043187
NCBI-ProteinID:
XP_042459623
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All DBs
Position
2A:complement(169250845..169268237)
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AA seq
1139 aa
AA seq
DB search
MASRLLEQQEKLRRAVDEWRTRSHDLLRDLAGDPFSIPSFAPTTTDPIRLFVCPIEHSQL
STILRSDNVSLSKFISVFSYDCIEISNLSNLASKRLFRQLQLFGHRSSPQEVLLEGEPQK
AFGESLSLFIELYETTIRMAELLGNLLQQLNSVYSIGDKNVRPLNSIKNLMLRTAFEALG
EGLAVFLVLDEIIKQNEHIKNYLSSFSRMLSKVKLEIDTFDITVEDIDLLDQVVVHFEKL
LEVNFFKWLVYKESSWLGIMQQVKGNKKFIDGCFSCIHDGLVDILLRLDTWKELPVDRLK
ILQHMALFIFSTHVSDVIPEKKLVKMLLDMLHLSPLLYIRGKRIMLVDVLKEQSPSSLSS
WLFLREAIRDRNLMINNYLKRLNDIHSRDWQTIKDTLSCWVASFHSTVHPVAELLSEGWL
RIHQKKTIQGLVVAYRLQLLIQSILDLHALLEVPIKREKLKSLCHMIISLKVLEQTFQTK
GSDMIKSLPHTINIIQADLEQIILPSKDMLQIEVDKRSQINQLGIFSSLTRRKETDTRLT
DSLSLVHMLLQMLQGGGSHKRQLIFLNILDVLQSIGYLNIDFTRVRKLTSKLWTLVGFQA
ISSAVVDSSFLYWRREMMGSLFSMVYVEVGRFSWLHRYLIDAFSDGLKLLKLGQVGKHTL
EAYQNEIEYGVKNEIIIPLCRDIENDLRLHVHSTYFKGSVVVNPTKTGVRNLAWYLAIKP
LHLSFKFIDISSHVENYLNSAFYNHSTMPTYDRKIYLEMQLLAELKYGLMLDDVYFVGNS
MVHDIGINETVQDLCAFTKNYTYNIIKQVFIDKIPKGKNRKNLRLIGVEDITHSVSIHGL
QVIYKASDSIQKFLEQMFTNLSPLLKNKCRTDSSNDYILKNNKEIVSRLPFLKQDHEASF
LEPLNVIMSQIGNALGLVRILLAGSSRHICNISRPTLDMSFEESYQKLGLADEILEAGRV
MDKAIAEKYEPVARMESFSDFINRFVKEHPFGTEDHAKDLSQIVPSIIVNLVSAQVRYKD
NLLSDHDSENTLYMHDSLFMGVAFALKVSAQESSFDALNWFGSARQSLEERISSLELTGS
SKAQDTNSRVGGSLARWKLWSQTSPIPLEIQKGLDECIKYQKEIELVEYVLNAARAFIS
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcggctcttagagcagcaggagaagctacgccgagcagtcgacgaatggcgc
acccggagtcacgacttgctcagagacctcgctggagaccccttttccatcccttccttc
gcaccgaccaccaccgatccgatacgcctcttcgtctgtcccatagagcactcccagctc
tccacgatcctccgatccgacaacgtttccctctccaagttcatcagcgtcttctcgtac
gactgcatcgaaatctccaatctcagcaatttggcatcgaaacgattgttcaggcagttg
cagttgttcggtcatcgatcaagcccgcaggaggtgcttctcgaaggtgagcctcagaag
gcgtttggagaatcgctgtcgctgttcatcgaattgtacgagaccacgatcaggatggcg
gagcttttgggaaacttactacagcagctcaattcagtttactctattggagacaagaac
gtccggccattaaattcgattaaaaatctgatgttgaggacagcttttgaagcgcttggg
gaaggcctggcagtgtttcttgtcttggacgagatcataaagcagaatgaacacataaag
aactacttgtcttctttctcaaggatgcttagtaaggtgaaactagagattgacactttt
gatataactgttgaggacatagacttattagaccaagttgttgtccattttgagaagctt
ctagaagttaatttcttcaagtggttagtgtacaaggaatcatcttggctgggaataatg
caacaggtaaagggcaataagaaattcatcgacggatgtttttcttgcatccatgatggt
ttagtagatatccttctaagacttgatacttggaaggaactcccagttgatcgattgaag
atattgcagcatatggctctgtttatattttccacacatgtctctgatgttattcctgag
aagaaactagttaagatgctgctggatatgcttcatctgtccccgcttttgtatattaga
ggcaagagaattatgctagttgatgttctgaaagaacaatctccttcatcattatcctct
tggctgtttttgagagaagccataagggaccgtaatctaatgattaacaattaccttaag
cgcttaaatgatatccattcaagggactggcaaactatcaaagacacactttcttgttgg
gtagcatcttttcattcaactgttcatccagtggcggaattgttgagtgaaggatggtta
aggatacatcagaaaaagactattcagggattagttgtggcatatagactacagttgctt
attcagtcaatactcgacttgcatgcattacttgaggttccaatcaagagggagaagctc
aagtctctttgtcatatgatcatttcattgaaggttttggagcaaaccttccagaccaaa
gggtctgatatgattaaaagtctcccacataccataaatattattcaagcagatcttgag
cagattatattgccttctaaggatatgctacaaattgaagtggataaaaggagccaaata
aaccagttgggcatttttagttcattaacacgtagaaaagagacagatacccggcttaca
gattctctatctttggtgcatatgctgttgcaaatgcttcaaggaggaggtagccacaag
agacagctaattttcttgaacatcttggatgttcttcaaagcattggctacttgaatatt
gactttacaagggttagaaagttgacttcaaagttatggacactggtaggcttccaggct
atcagttctgctgttgttgattctagcttcttgtattggagaagggagatgatgggaagt
ttgttttcaatggtttatgtggaagtaggaaggttttcatggttacacaggtaccttatt
gatgcattttcagatggactgaagcttcttaagcttgggcaagttggaaagcacactctg
gaagcatatcagaatgaaattgaatatggtgtgaaaaatgaaataattatccctctttgt
agagatattgaaaatgatctccgtcttcatgttcattcaacttattttaagggatctgtg
gttgtaaacccaaccaagactggtgtgcgcaatcttgcatggtacttggcaatcaaacca
ttgcatctttctttcaagttcattgatataagttcacatgttgagaactatttgaattct
gccttctacaatcactcaactatgccaacatatgacagaaagatatacctagaaatgcag
cttctagctgagctaaagtatggtttgatgttggatgatgtctattttgttggaaattct
atggttcacgacattggtatcaatgagacagtccaagatctctgtgccttcaccaagaac
tacacttataacataattaagcaggttttcattgataaaattccaaaaggtaaaaacagg
aagaacttgcgactgattggtgtggaggacattacacattcagtttctattcatggtcta
caagtaatatacaaggcttcagattcaatacagaaatttttggaacaaatgtttacaaat
ttgtctccgttgcttaaaaataaatgtaggacagactcgtcaaatgactacatcttgaag
aacaacaaggaaatagtaagcagacttccctttttaaagcaagatcatgaggcaagcttc
cttgaacctctcaatgttatcatgagtcagattggaaatgctttgggactagtgagaatt
cttctagcgggcagttctcgtcatatttgcaacatttctcgacccacacttgatatgagc
tttgaggagagttaccagaaacttggtttagctgatgaaattcttgaagctggaagagtg
atggataaggcaattgcagagaaatatgaacctgtcgcaagaatggaatctttttctgat
ttcataaacagatttgtcaaggaacatccgtttggcacagaagatcatgccaaagatttg
tctcagatagttccttcgatcatagtaaatttggtgagcgcccaagtgcgttacaaggac
aacctgctgtcggaccatgattctgaaaatactctgtacatgcatgatagcctcttcatg
ggggttgcttttgctctcaaggtgtcggcacaagaaagctccttcgatgctctcaactgg
tttgggtctgcaaggcagagccttgaagagcgcatatcctctttggaactcacaggcagc
agcaaggctcaagataccaatagcagagtgggtggcagcctcgcccgctggaagctgtgg
agccagacttcaccaattcctcttgagatccagaagggtttggatgaatgcatcaagtac
caaaaggaaattgaattggttgagtatgttctcaatgctgccagagcattcatctcttga
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