Zingiber officinale (ginger): 122043215
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Entry
122043215 CDS
T08725
Name
(RefSeq) ABC transporter E family member 2-like isoform X1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122043215
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
122043215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_15
AAA_22
RsgA_GTPase
Fer4_6
AAA
AAA_29
AAA_23
Rad17
NACHT
Fer4_21
Fer4_2
TsaE
nSTAND3
SRP54
ORC-CDC6-like
Fer4_10
AAA_33
AAA_5
Fer4_4
AAA_24
Fer4_9
Fer4_16
AAA_19
Fer4_7
Fer4_8
Fer4_17
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
122043215
NCBI-ProteinID:
XP_042459668
LinkDB
All DBs
Position
2A:complement(169975127..169981144)
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AA seq
605 aa
AA seq
DB search
MADRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTSASKIAFVSEELCIGCGI
CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV
QGNVGQVLDQKNERDMKAELCADLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMF
DEPSSYLDVKQRLKAAQVVRSLLRLNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQESAEDIQTYQRYRYPTMTKTQG
NFKLKVIEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDAVEDSDVEIPEFNVSYKPQ
KISPKFQSTVRHLLHQKIRDSYLHLQFVSDVMKPLQIEQLMDQEVVNLSGGELQRVALCL
CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADKVIV
YEGRPSIDCVANAPQSLVSGMNLFLSHLDITFRRDPTNYRPRINKLDSTKDREQKGAGSY
YYLDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggctgacgcgtatcgctatcgtcagctctgatcgatgcaagccgaagaag
tgccgccaggagtgcaagaagagttgcccagtcgttaaaacgggaaagctttgtatagaa
gttacttctgcctcaaaaattgctttcgtttccgaggagttatgcattggatgtggtatc
tgcgtcaagaaatgcccatttgaggccattcagattatcaacctaccaaaggacttggat
aaagatacaacccaccgttatggaccaaacacatttaaacttcataggttgcctgttcca
agaccaggacaagttctaggcctggttgggacaaatggtattggtaagtctactgcactc
aaagtattagctgggaagttgaaacctaatttggggcgattcaataatcctcctgattgg
caagaaattttgacatattttcggggctccgagcttcagaattatttcactcgtatacta
gaggacaatctaaaggcaatcatcaaaccacaatatgtggatcacattccaaaagctgtt
caagggaatgtgggccaggttcttgaccaaaaaaatgagagagacatgaaggctgaacta
tgtgctgacctggaattaaatcaagttattgatcgaaatgtgggagatttatctggcggg
gaattgcaaagatttgctattgcagtagttgcaatacaaaatgcagagatatatatgttt
gatgagccttcaagctatcttgatgtaaagcagaggcttaaagcagcacaagttgtacgc
tccctgcttaggcttaacagctatgtgattgttgttgagcacgacctgagtgtattggac
tacttgtccgattttatttgttgcttgtacgggaagccaggtgcttatggagttgttaca
cttcccttctctgtgcgagaagggatcaacattttcttggctggttttgttccaacagaa
aatctccggtttagagatgaatcactaacatttaaggttgctgagactccccaagaaagt
gctgaggatatacagacgtaccaacgttatcgatatcctaccatgactaaaacccaaggg
aacttcaagctcaaagtgattgagggtgaatttactgattctcagataattgtaatgctg
ggtgagaatgggactggaaagacaacatttataaggatgctggcaggattactgaagcct
gatgcggtggaagattcagatgttgaaatacctgaatttaatgtttcatacaagcctcag
aaaattagtccaaagtttcaatcaactgttagacatttgctgcatcagaaaatacgggat
tcttatttgcatctgcaatttgtctctgatgtcatgaaaccattgcaaattgaacaatta
atggatcaagaagttgtgaatctttctggtggagaattacaacgagttgcattatgtttg
tgtcttgggaagcctgcagatatttatctgatagatgaaccaagtgcttatcttgattcg
gagcagcgtattgttgcctcaaaggtaattaaaaggttcatcctgcatgcaaagaaaaca
gcttttgtcgtcgagcatgatttcatcatggcaacctacttagctgataaagtcattgtt
tatgaggggaggccttctattgattgtgttgctaatgcgcctcagtctttggtatctggg
atgaacctattcttatctcatctcgatattactttccggcgtgatccaactaactacagg
cccagaataaacaagttggactctaccaaagatcgagaacagaaaggtgctggatcttac
tactaccttgatgattaa
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