Zingiber officinale (ginger): 122043240
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Entry
122043240 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122043240
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122043240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122043240
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
122043240
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
122043240
NCBI-ProteinID:
XP_042459705
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Position
2A:170443334..170449216
Genome browser
AA seq
1317 aa
AA seq
DB search
MAILKNASRVLRTGGGSPPQSASSQEEYGELCAGIGKSESYASEASYVDSGMETDECDRL
ELGDPGAQLCQVGNQSFFVPLELFDLPDLGSILSLETWNEYLTEEERFALSGYLPDMDQE
TFGITLKELFSGENFHFGSPPITLFSQLKGGLCDPNIILYRRGLVSLQWRDHYHCLHSYQ
NSMVRSLVSLKDAFQSCAGYSIQERIQFLNTVKRQRPLERNEDVSFETNSEEVNMDHLYS
SYSSKASRQFLKPSTDIKLRDIGMGREPVIFGKGKTKGVLKVTTSKFPAQESASSAHSSS
LKYGMSSKYKAKIPQLPVTAKDKYTGFHLESPPKTMHYTGEDQDDMEEEYVIPPKDWKSG
HRSIATSSLFRIGKNEKSAKRHDANIYSDEEPADYSSFSHSWRKNGNAHHMVTIASYGDE
SPEKANKARNFERELSPSTTGETQNLMMSRLMRQNKFHEDSILPDHFLKLDGLNHRATKW
NIKHEYGTGDDGVDYNLKSKSFRTFPTQTNDVYLHNDHRIRNSHRKMKNNLNEVEDMSMN
YSRITTMAAQSEETESETSDQVGNGGSTNPMIRNLRFRGADTEPGHSSIVKSTYDYEKHD
ELIDEDRKCPSTFPDVDRHVYTPDIDSYSVKIKCSKSVKKGIRQDTSEKLKDAEKKHTRM
VNMDHSSQQSFYAVDYRGGMMDEHLDNLDEISKLQGSNSKANRLGNTAQFSDSQSMHANS
ETSGLPLKGCNSASKKPKWKVNNGHYPDEPDDSLYLKKPSAKQQKGKRKVVAETDTLTAV
SSDLGTSKKDAEDVEPKPKLQKKPFTLITPTIHTGFSFSIVHLLSAVRKAMITHQMDDST
FNDAHLQNRNCSTIQITKELNEMGLIENNKHLAHSVEAMVNQACFPSLAFQEIVERVRSN
PGDPCILETREPLQDLVRGALKIFSSKTAPLGVKGWKPLILHDKLNKSWLWTGPISSGLP
DNENAEEEISSEAWGIPYKMLVKLVDAFANWLKSSQETLQQIGSLPPPPTSLLSNLDEKE
RFKDLRAQKSLNTIGSSSTEVRAYFRREEFLRYSVPDRAFSYTAADGRKSIVAPLKRGGG
KPTSKARDHFMLKPDRPPHVTILCLVRDAAARLPGSIGTRADVCTLLRDSQYVVENVSDT
QVTQIVSGALDRLHYERDPCVQFDSERKLWVYLHREREEEDFEDDGTSSTKKWKRQRKDL
EIGNDVDTGSLAVCDFSTGLDHDHNLNVGTTSFGSGEIAEHLNEDMGVNVENFHSLMDTN
IVSEGNSNWNSLGLNLLNENRLVCQKNSTDEDYNDETFCQERPVQLHYDHIMNKRLY
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggcgattttgaagaatgcctctagggttttgaggacgggcggtggttccccgcctcag
agtgcgtcgagccaggaggaatacggagagctttgtgcagggatcggcaagtcggagtcg
tacgcttcggaggcttcttatgtggactccggcatggagacggacgagtgtgatcggtta
gaactcggcgatcccggagctcaattgtgccaagtggggaaccagagctttttcgtcccg
cttgagctctttgatctccccgacctgggttccatcttgtcattggagacgtggaatgag
tatctcacggaggaggagcgctttgccctgtctgggtaccttccagacatggatcaggag
acctttgggattaccctcaaggagctgttttctggggaaaattttcactttggtagcccg
cccattactcttttcagtcagttgaaaggtgggttatgtgacccgaatatcattctttat
cgccgtggattggtttccttgcaatggcgtgatcactaccattgcctgcacagctatcaa
aattctatggtgaggagtcttgtcagcctgaaggatgcatttcaaagttgtgctggttat
tctattcaagaaagaattcagtttctgaatacagtgaagagacagaggcctcttgagagg
aatgaggatgttagttttgaaacaaattcagaggaagtaaatatggatcacctctactca
agttacagctctaaggcctctcgtcaatttctgaagccttcaactgacattaagcttcgc
gatattggcatgggcagggagcctgtgatatttggtaaagggaaaacaaaaggagttttg
aaggttactacttctaagtttccagcacaggaaagtgcatcttctgcacattcttcatct
ttgaagtatggaatgtcctcaaaatataaagcgaaaattccacagttgcctgtcactgcg
aaggataaatatacagggtttcatttggaatctcctccaaaaactatgcattatactggt
gaagatcaagatgacatggaggaagagtatgtgattccaccaaaagactggaaatctgga
cacagaagcattgcaactagtagtttatttagaataggaaagaatgagaaatcagcgaaa
agacatgatgcgaacatatatagtgatgaagagcctgcagactacagtagtttcagccat
tcttggaggaaaaatggaaatgcacatcatatggtaactattgcttcttatggtgatgaa
tctcctgaaaaggcaaacaaggctagaaattttgagagagaattgtcgccttctaccaca
ggtgaaactcaaaaccttatgatgagtcgtctcatgaggcaaaataagttccatgaggat
tcaattttaccagatcatttcctgaaactggatggtttgaaccacagagctactaaatgg
aatatcaagcatgaatatggaactggagacgatggagttgattataatttgaaatccaaa
tctttcagaacttttccaacacagaccaatgatgtttatctccacaatgatcatagaatc
agaaactcacataggaagatgaaaaataatttgaatgaagttgaggatatgagcatgaac
tactcgagaatcactactatggctgctcagagtgaggagacagaatctgaaacatctgac
caggtcgggaatggtgggagtaccaatcctatgatcagaaatttgaggtttcgaggtgct
gacactgaacctggtcattcttctattgttaaatcaacctatgactatgaaaagcatgat
gaactcattgatgaagatagaaaatgtccttccacctttcctgatgttgataggcatgtt
tatacaccagatattgattcatattctgtgaaaataaaatgttcaaaatcggtgaagaag
ggcataaggcaagacacaagtgagaagttgaaagatgctgagaagaagcacacaaggatg
gtcaacatggatcattcttcacagcaatcattttatgcggttgattacagaggtgggatg
atggatgaacatttggataacttggatgaaatttcaaagttacaaggcagtaatagcaaa
gctaatagattagggaatacagcccaattctctgattctcagtccatgcatgctaattct
gaaacatcagggcttcccctaaaaggttgtaattctgcatcaaagaaacctaaatggaag
gttaataatggtcattacccagatgagccagatgattccctttatttgaaaaaacccagt
gcaaagcagcagaagggtaaaaggaaagtagtcgcagaaactgacactttgactgcagta
agttctgatctgggtacatctaaaaaggatgcagaagatgtagaacctaagccaaaatta
cagaagaagccattcactcttatcacaccaactattcacactggtttctcattttccata
gtccatctactttcagctgttcgaaaggcaatgattactcatcagatggatgattccaca
tttaatgatgctcatcttcagaacagaaactgcagcacaatacaaattacaaaagagctg
aatgagatgggcctaatagaaaataacaagcaccttgctcattctgtcgaggctatggtt
aaccaagcctgttttccttctcttgcttttcaagagattgttgagcgagtaagatcaaac
cctggagatccatgcatccttgaaacacgggaaccacttcaagatttagtccgaggagct
ttaaagatattttcatctaagacagcacctttaggagtcaagggttggaagcccctaata
ttacatgacaagttaaataaaagttggttatggacaggccccatttcttctggtttgccg
gacaatgaaaatgcagaagaggaaatttcttcagaagcatggggaattccatacaagatg
cttgtaaagttggttgatgcttttgctaattggctcaagagtagccaggagaccctccag
cagattgggagcctccctcctcctcctacttcattgctttctaacttggatgagaaggag
aggttcaaagatctgagagctcaaaagagtctaaacactattggttcaagttcaactgag
gtaagagcatacttccgcagagaggaatttttaaggtactcagttccagatcgggccttt
tcctacacagctgctgatggtagaaaatcaattgttgctccattgaagagagggggtgga
aagccaacatcaaaggcaagggatcatttcatgcttaaacctgatcgaccacctcatgtt
actattctttgtcttgttcgagatgcagctgccaggttgcctggtagtattggaactagg
gcagatgtttgtactctgctaagggactcacaatatgttgttgaaaatgtttctgataca
caagtgactcaaatagtgagtggggctctagatcggttgcattatgagcgcgatccttgt
gtacaatttgatagcgaaagaaaattgtgggtttatcttcatagagagagggaagaggaa
gattttgaggatgatggaacctcatcaactaagaagtggaaaaggcagaggaaagatctt
gaaattggtaatgatgttgacactggttccttggctgtttgtgacttttccactggcctg
gaccatgatcacaacctaaatgttggaacaacatcttttggatcaggagaaatagctgag
catcttaatgaagatatgggagtaaatgtagagaactttcattctcttatggacacaaac
attgttagtgagggcaatagtaattggaattctctgggattgaatctattaaatgaaaac
aggttggtatgtcaaaagaactccactgacgaggattacaatgatgagacattttgtcaa
gagaggccagttcagttgcattatgaccacattatgaataaaagattatactag
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