Zingiber officinale (ginger): 122043251
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Entry
122043251 CDS
T08725
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT3-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00270
Cysteine and methionine metabolism
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
122043251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122043251
03032 DNA replication proteins [BR:
zof03032
]
122043251
03036 Chromosome and associated proteins [BR:
zof03036
]
122043251
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
zof02048
]
122043251
Enzymes [BR:
zof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
122043251
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
122043251
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
122043251
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122043251
Prokaryotic defense system [BR:
zof02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
122043251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
122043251
NCBI-ProteinID:
XP_042459717
LinkDB
All DBs
Position
2A:complement(170594833..170602614)
Genome browser
AA seq
1201 aa
AA seq
DB search
MTTASAEKRTRRMQRAAEVDGGSATPPTTIGGKKRATDTDSGWATGLEVSKKSAAEASAV
RVVNGESPAPPNTRGKKRATETASAAGVVNGVSPAPPNTREKNRATETASAVGVVNGVSP
APPNTRGKNRATETASAVGVVNGVSPAPPNTRGKYRATETASAAGLVNGVSPAPPNTRGK
NRVTETASTVGVVNGVSPAPPNTRGKNRATETDSGRATGLEVSKKSAAEASAVGVVNGVS
PATPNTRGKKRAIETASTVGVVNGVSPAPPNTRGKKRATETDSGRAMGLEVSKKSATEAS
AVGGVNVVSSASPNTRGKKRVTNTNGPAKDAAGVKKRTKETSLVVGGSNGVALAALVPDQ
SVEDEDLDNDGYYVGSDLGSQQAEKHEMEEKGQNEVMSIKISPKKKVGHSKKSKEGAVLG
CHFVGDPIPEAEAKQRWPERYQRKIYASGSAKRVDGESVLLARQHYSQAIVDGVNYNLYD
DAYVEAGEGEAYYIGRIVEFFEAIDKQQYFTAQWFFRAEDTVIKEHAHSHGSKVMHDSRR
VFLSEEKNDNVLECIVSKLQIQRVTPNINLQAKVKSIPPCDLYYDMSYSLAYSTFTNLPE
SIRIGNDSSSTISLEDAPNSSNKKALSDSEATSSDQKNVITLLDLYSGCGAMSTGLCLGA
NLSGINLQTCWAVDLNEYACQSLKLNHPETEVRNEKADDFLALLIEWEKLCTNYCVFGNK
SLNEEESDSNGSDDELDSNPPNGEEFEVEKLVGICYGDPNNIGKVGIKFKVHWKGYNSSH
DTWEPIDGLSNCQERIMEFVKKGYKKNILPLPGQVDVICGGPPCQGISGFNRFRNKNAPL
DDPKNQQMLVFMDIVEFLKPKYVLMENVVDILKFANGFLGRYALSRLVAMNYQARLGMMV
AGCYGLPQFRMRVFLWGARPTEILPQFPLPTHDVVVRGGAPNEFEQNIVAYDEDQHPQLE
KKLLLEDAISDLPEIGNYEDRDEMPHDRPPITEFQKFIRLSRIDLCGCAQALASGSIVDR
PIAKHQFFDHRPLQLNDDDYQRVCAIPKKKGANFRDLPGVKVGKDNTVEWDPDVERVFLP
SGKPLVPDYAMTFVRGKSSKPFGRLWWDETVPTVVTRAEPHNQVILHPEQDRVLSIRENA
RLQGFPDYYQLRGTVKERYTQVGNAVAVPVARALGYALGQAYQGHSNGVPLFALPRHFLL
Q
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggcatcagcggagaagcgcacgcggcggatgcagcgggccgccgaggtcgat
ggcggcagcgcgacgcctcccaccaccatcggaggaaagaaacgggcgactgatactgac
agtggttgggcgacgggtttagaagtaagtaagaagagcgcggcagaggcatcggcggtc
agagtggtgaatggggaatcccccgcgcctcccaacaccagaggaaagaagcgcgcgact
gagaccgcatcggcggccggagtggtgaatggggtatccccggcgcctcccaacaccaga
gaaaagaatcgcgcgaccgagactgcatcggcggtcggagtggtgaatggggtatccccg
gcgcctcccaacaccagaggaaagaatcgcgcgaccgagactgcatcggcggtcggagtg
gtgaatggggtatccccggcgcctcccaacaccagaggaaagtatcgcgcgactgagact
gcatcggcggccggactggtgaatggggtatccccggcgcctcccaacaccagaggaaaa
aatcgcgtgactgagactgcatcgacggtcggagtggtgaatggggtatccccggcgcct
cccaacaccagaggaaagaatcgcgcgactgagactgacagtggtagggcgactgggtta
gaagtaagtaagaagagcgcggcagaggcatcggcggtcggagtggtgaatggagtatcc
ccagcgactccaaacaccagaggaaagaagcgtgcgatcgagactgcatcgacggtcgga
gtggtgaatggcgtatccccggcgcctcccaacaccagaggaaagaagcgcgcgactgag
acggacagtggtagggcgatgggtttagaagtaagcaagaagagcgcgacagaggcatcg
gcggtcggaggggtgaatgtggtatcctcggcgtctcccaataccagaggaaagaagcgc
gtgacgaatacgaacggccctgccaaggatgcagctggagttaagaaacgaacgaaggag
acatctttggtggtcggagggtcaaatggcgtagcgctggcggctctggtacctgatcaa
tcagtcgaggacgaggatcttgacaatgatggatattatgtcggtagcgatctaggatct
cagcaagctgaaaagcacgaaatggaagaaaaaggacaaaatgaagtgatgagcatcaag
atatcgccaaagaagaaggtgggacatagcaaaaagtccaaggaaggtgcagttcttggt
tgtcactttgttggtgatcctattccagaggccgaagctaaacaacgttggccagaaaga
taccagaggaaaatttatgcttctggaagtgctaaaagggtggatggtgaatcagtattg
ttagcgaggcagcattattcacaagccatagtggatggagttaattacaatctttatgac
gatgcctatgtcgaagcaggtgaaggagaggcttattatattgggcgtatagttgagttt
tttgaagcgattgataagcaacaatacttcacggctcagtggttctttagagcagaagac
actgttataaaagaacatgcccattcccatggttcaaaagtgatgcatgattcaaggaga
gttttcttgtctgaagagaaaaatgacaatgtcttggagtgcattgtctccaagctacaa
attcaacgagtgactccaaatattaatttgcaagccaaggtgaaaagcatccctccttgt
gatctttattatgacatgtcatattctttggcatattctacatttactaatttgcctgaa
agtataaggattggcaatgattcttcatccactatttctttagaagatgctcctaattct
tcaaataaaaaagcattgtcagattctgaagctacatcttctgatcaaaagaatgtgatc
actttgcttgatctttattcaggttgtggggctatgtccactggtctatgcttgggtgcc
aatttgtctggcataaatctccaaacatgttgggcagttgatttaaatgaatatgcatgt
cagagtttaaagttgaatcatccagagactgaggtgagaaatgaaaaggctgatgatttt
ctagctcttttgattgaatgggagaaactatgtacaaattattgtgtattcggaaataaa
agtttgaatgaagaagaaagtgattcaaatggttcggatgatgaacttgattctaatcct
ccaaatggtgaagaatttgaggttgaaaaattagttggtatttgctatggtgatccgaat
aacattggaaaagttggaataaagtttaaggttcattggaaaggatataatagtagccat
gatacatgggagccaattgatggcctaagcaattgccaagagagaattatggagtttgtg
aaaaagggatacaaaaaaaatattttaccattacctggccaagtggatgtgatttgtggc
ggtcctccttgtcaaggaataagtggatttaatcgttttagaaataagaatgctccattg
gatgatccaaagaatcaacaaatgcttgtttttatggatatcgtagagttcttgaagcca
aaatatgtccttatggagaatgttgttgacatactcaagtttgccaatggctttttggga
agatatgcattgagtaggttggttgctatgaactatcaggcaaggcttgggatgatggtt
gctggatgttatggattgcctcaatttcggatgcgtgtgttcctttggggtgctcgtcca
actgagattttgcctcagtttccattacctactcatgatgtggtggttcgtgggggtgca
cctaatgagtttgagcaaaacattgttgcatatgatgaagatcaacatccacaacttgag
aagaaactactcttagaggatgctatatctgatctcccggagattggtaattacgaagat
agggatgaaatgcctcacgacagacctccaataacagagtttcagaagttcattcgcctt
tcaaggattgatttatgtggatgtgcacaagctttagcatccggatctattgtggataga
ccgattgcaaagcaccagttttttgatcacagaccactgcaattaaatgacgatgattat
caacgtgtttgtgcaattcctaagaaaaagggcgcaaacttcagagatttgccaggagtt
aaagtcggtaaggataatacagttgagtgggatccagatgtcgagagagtttttttgcca
tctgggaaacctctggttcctgattatgcaatgactttcgtcagaggaaaatcctcaaag
ccttttggacgactttggtgggatgaaacggttcccaccgtcgtaacaagagctgaacct
cacaaccaggtgattctgcatccagagcaggatagggtgctttcaattcgtgagaatgct
aggcttcaaggcttcccagattattatcaacttcgagggactgtaaaagaacgatacact
caagtgggaaatgctgttgctgttccagtcgcaagagcattaggttacgcactgggtcaa
gcgtaccagggtcatagcaatggtgtgcctctctttgcacttcctcgccactttctgctg
caatag
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integrated database retrieval system
