Zingiber officinale (ginger): 122043278
Help
Entry
122043278 CDS
T08725
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122043278
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122043278
04147 Exosome [BR:
zof04147
]
122043278
04090 CD molecules [BR:
zof04090
]
122043278
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122043278
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122043278
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122043278
CD molecules [BR:
zof04090
]
Proteins
122043278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Zeta_toxin
AAA_22
ABC_ATPase
AAA
AAA_29
RsgA_GTPase
DUF87
AAA_24
AAA_30
APS_kinase
Motif
Other DBs
NCBI-GeneID:
122043278
NCBI-ProteinID:
XP_042459759
LinkDB
All DBs
Position
2A:complement(171920723..171925558)
Genome browser
AA seq
1228 aa
AA seq
DB search
MDEGNKVEGKAEEGESRPRTGIFLFADWADVALMAAGTLGAVGDGCSINCLLLFASAVMN
SLGAGNAQNSGHNHADFMQDVKKHCLYFVYVGLATLVVAFMEGYCWSRTSERQVLRIRHK
YLEAILRQEVAFFDSQEATTAEVINSISKDTALIQEVLSEKVPLFIMHSSTFISGLAFST
YFSWRLSLVALPLVGVLVIPGLIYGKYLVYLSRESREAYGKANAIVEQALSSIKTIYSFT
AEKSIAERYSVILEKTVRLGIKQGIAKGLAVGSTGLSFAIWAFLAWYGSGLVMYHGESGG
RIYAAGISFVLGGLSLGMALPEVKHFAEASVAAKRILERINRRPRIYAEDPKGLKMEEMR
GEVAFESVEFAYPSRPEVPVLRDFSLRVPAGQTVALVGTSGSGKSTAVALLQRFYDADAG
AVRIDGVDIRKLQLKWIRAKMGLVSQEHALFGTSIRENILVGKPGAAAGEIFAAAMTANA
HNFIRQLPEGYETKIGERGALLSGGQKQRIAIARAIIKNPAILLLDEATSALDSESEKLV
QNALDQASMGRTTLVVAHKLSTIKNADQIAVVDCGRIVEIGTHDELIAEKNSHYSRLVKL
QRIPSNLDPEPESFRPSSVARSSASRLSLTKASPAFSEDQSTASVAASPAPSFSRLIAMN
APEWKQAVVGSLSAVVFGSVQPIYAFSIGGMIAAFFLQDHDEMKAAIRRFALIFSALSLV
SIIVNLLQHYNFAYMGERLTKRIRIRALEKILTFEVGWFDDDEHSSGALCSRLSHEAALV
KTLVADRLSLLLQTASGVVVAMTMGLAIAWKLALVMIAIQPSTMICHYAKKVVLSRVSVA
LAKAQHSSTQIAIEAVYNHRMVTSFGCADKVLELFKEAQEEPVRASRKKAWVAGLATGSA
PCLSFLSWALDFWYGGRLAQSGEISAGDVFKTFFILVSTGKVIAEASSMTSDLAKGATAV
ASVFEVLDRQSFISTSSSPSSNGETKQIQGKIEIRKVDFTYPTRPLCPVLRDFSLEVKAG
TSVGFVGRSGCGKSTVVSLILRFYDVDRGVVRIDSTDVRELDLIWFRGFTALVSQDPVIF
SGTVRDNIALGKPSATEDEIVEAARAANAHNFISSLKDGYGTNSGERGAQLSGGQKQRIA
IARAIVRNPRILLLDEATSALDVESERAVQEALDRIMVGRTTVVVAHRLNTIKKVDSIAF
LGEGKVVERGSYAQLMAKKGAFFDLAAP
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggggaacaaggtagaaggcaaagctgaagaaggcgaaagccgaccaagaact
gggattttcctgttcgctgattgggccgacgtcgctctgatggcggcggggacgctcgga
gccgtcggcgacggctgctccatcaactgccttcttctcttcgcgagcgccgtcatgaac
agcttaggcgccggcaacgctcaaaacagtggtcataaccatgcagacttcatgcaggac
gtgaaaaagcactgcttgtacttcgtgtacgtgggattagcaactctggtggtggctttc
atggaagggtactgctggagcagaacgagcgagaggcaggtgctgaggatcaggcacaag
tatttggaggcgattctgagacaagaggttgccttctttgattcgcaggaggcaaccacc
gcagaggtcattaacagcatctccaaggacactgctctcattcaagaagtgctcagcgag
aaggtgcctctgttcatcatgcactcttccaccttcatctccggcctggccttctcgacg
tacttctcgtggaggctgtcgttggtcgccctcccgctcgtcggcgtcctcgttatcccg
gggctcatctacggcaagtacctggtctacctgtcgcgcgagtcccgcgaggcgtacggc
aaagccaacgccatcgtggagcaagcgttgagctcgatcaagaccatctactcgttcacg
gccgagaagagcatcgcggagaggtactccgtcatcttggagaagacggtgaggctgggg
atcaagcaggggatcgccaagggactcgcggtgggaagcactgggttgtccttcgccatc
tgggcgttcctcgcctggtacggcagcgggctggtgatgtaccacggcgagagcggcgga
aggatttacgccgccggaatttccttcgttttgggcggattatctcttggcatggcgctg
ccggaggtgaagcacttcgcggaggcgtcggtggcggcgaagaggatactcgagaggatc
aacaggcggccgcgaatctatgcggaggatcccaaggggttgaaaatggaggagatgcgc
ggcgaggtggcgttcgaatcggtcgagttcgcgtacccttcgcggccggaggtgcccgtg
ttgagggacttcagcctccgggtcccggcggggcagacggtggcgctggtgggcaccagc
gggagcgggaagtcgacggccgttgcgctgctgcagcggttctacgacgcggacgccggc
gcggtgaggatcgacggcgtggacatcaggaagctgcagctgaagtggatcagggcaaag
atggggctggtgagccaggaacatgctctgttcgggacgtcgatccgggagaatattttg
gtggggaagccaggcgccgccgccggcgagatattcgcggcggccatgacagcgaatgcc
cacaacttcatcaggcaattgccggagggatatgagaccaagatcggggagagaggcgcg
cttctgtccggcggccagaagcagagaatcgccatcgccagagcgatcatcaagaaccct
gcgattcttcttctcgacgaagccacgagcgcgctcgactctgaatcggaaaagctggtg
cagaatgccctcgatcaagcttccatgggaagaacaacactggtggtggctcacaaattg
tcgacgattaagaacgccgaccaaatcgcggtggtagattgcggaaggatcgtggagatc
ggcacccacgacgagctcatcgccgagaaaaacagccactactcgcgcctggtgaagcta
cagaggatcccgagcaatctcgatccggagccggaatccttccgcccttcctccgtcgcc
aggagcagcgcgagccgcctcagcctcaccaaagccagccccgccttctccgaggaccaa
tccaccgcctccgtcgccgcctcccctgcgccctccttctctcggctcatcgccatgaac
gcgccggagtggaagcaggctgtggtcggcagcctctccgccgtcgtttttggatccgtt
caacccatctacgccttctcgatcggcggcatgatcgccgccttcttcctccaagaccac
gacgagatgaaagccgccatccgccgctttgccctaattttctccgccctctctctggtt
tcgatcatcgtcaatctgttacagcactacaacttcgcttacatgggcgagcgcttgacg
aagcgcattcggatacgggcgctggaaaagatcctaactttcgaggtggggtggttcgac
gacgacgagcattccagcggcgcgctgtgctcgcggctgagccacgaggcggcgctggtg
aaaacgctggtcgccgatcgcctgtccctgctgctccagaccgcctccggcgtggtcgtc
gccatgaccatggggttggccatcgcctggaagctggctctggtcatgatcgcgatccag
ccctcgacgatgatctgccactacgccaagaaggtggtgctgtctcgggtgtcggtggcg
ctggcgaaggcgcagcacagcagcacgcagatcgccatcgaggcagtgtacaaccaccgg
atggtgacttccttcgggtgcgccgacaaggtgctggagctcttcaaggaggcgcaggag
gagccggtgagggcgtcgaggaagaaggcgtgggtggcgggcctggctaccgggagtgcg
ccgtgcctgtcgtttctgtcgtgggcgttggacttctggtacggagggagattggcgcag
tccggcgagatctcagccggagacgtattcaagaccttcttcatcttggtgagcacggga
aaggtaatcgccgaggccagcagtatgacttccgacctggccaagggcgccaccgccgtg
gcgtcggtcttcgaggtgttggaccgtcagtccttcatatcaacttcttcttccccttct
tccaacggcgagaccaagcagatacaaggaaagatcgaaatccggaaggtggacttcacc
tacccgacgcggccgctctgcccggtgctgcgtgacttcagcttggaggtgaaggccggg
acgagcgtgggcttcgtcggccgcagcggctgcggcaagtccaccgtcgtcagcctcatc
ctgcgtttctacgacgtcgaccgcggcgtcgtccgcatcgacagcaccgacgtccgggag
ctcgacctcatctggttccgcggcttcaccgcgctcgtcagccaagacccggtcatcttc
tccggcaccgtccgcgacaacatcgccctgggcaaacccagcgccacagaggatgagatc
gtcgaggccgcacgagccgccaacgcccacaacttcatctcatcgctgaaggacggatac
ggcaccaacagcggggagaggggagcgcagctatcgggagggcagaagcagaggatcgcc
atcgcgagggcgatcgtgaggaacccgaggattctgctgctggacgaggcgactagcgcg
ctggacgtggagtcggagagggcggtgcaggaggcgctggaccggatcatggtgggtagg
acgacggtggtggtggcgcaccgcctcaacaccatcaagaaggtcgactccatcgccttc
cttggcgaagggaaggtggtggagcggggtagctacgcgcagctgatggccaagaaggga
gccttcttcgacctcgccgctccgtga
DBGET
integrated database retrieval system
