Zingiber officinale (ginger): 122043356
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Entry
122043356 CDS
T08725
Name
(RefSeq) heat shock cognate 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
zof04141
Protein processing in endoplasmic reticulum
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122043356
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122043356
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122043356
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122043356
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122043356
03009 Ribosome biogenesis [BR:
zof03009
]
122043356
03110 Chaperones and folding catalysts [BR:
zof03110
]
122043356
04131 Membrane trafficking [BR:
zof04131
]
122043356
03051 Proteasome [BR:
zof03051
]
122043356
03029 Mitochondrial biogenesis [BR:
zof03029
]
122043356
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122043356
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
122043356
Spliceosome [BR:
zof03041
]
Complex B
Other components
Prp19 complex
122043356
Complex C
Prp19-CDC5 complex
122043356
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122043356
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP70 / DNAK
122043356
Membrane trafficking [BR:
zof04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
122043356
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
122043356
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
122043356
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
122043356
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
122043356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
122043356
NCBI-ProteinID:
XP_042459861
LinkDB
All DBs
Position
2A:complement(173649110..173651587)
Genome browser
AA seq
649 aa
AA seq
DB search
MAGVKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAK
NQVAMNPTNTVFDAKRLIGRRYSDPSVQSDIKLWPFKVIAGPGDKPMIVVQYKGEEKQFS
AEEISSMVLNKMKEIAEAYLGTTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINE
PTAAAIAYGLDKKGSSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDF
DNRMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDF
YSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSNVHDVVLVGGSTRIPKVQQLLQDF
FNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVL
IPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQ
INVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVHEAEKYKAEDEEHK
KKVEAKNALENYAYNMRNTIKDEKIGAKLPADDKKKIEDAIDKAISWLEGNQLAEADEFE
DKMKELEGICNPIIAKMYQGGGGGGMGMDEDIPTAGSSGGAGPKIEEVD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgtaaagggcgaaggtccggcgatcggaattgatctgggaaccacctattcg
tgcgtcggggtgtggcagcacgaccgggtggagatcatcgctaatgaccagggcaaccgc
accaccccttcctacgtcgctttcaccgacaccgagcgcctgatcggcgacgccgccaag
aaccaggtcgccatgaaccctactaatactgtgttcgatgcaaagcgtttgattgggagg
cgctacagtgatccctcggtccagagtgacatcaagctatggccattcaaggtgatcgcc
ggccccggcgacaagcccatgatcgtagtccagtacaaaggcgaggagaagcagttttcg
gcggaggagatatcctccatggtgctcaacaagatgaaggagatcgcagaagcgtatctg
ggaaccaccgtgaaaaacgccgtggtgaccgtcccggcttacttcaacgattcgcagagg
caggccaccaaggacgccggagtcatctccggccttaacgtcatgcgaatcatcaacgag
cctactgccgcggctattgcctacggcctcgacaagaaggggagcagttccggcgagaag
aacgtgctgatctttgatctcggtggtggcactttcgatgtctctcttctcaccatcgaa
gagggcatcttcgaggtgaaggccaccgccggagacacccatctcggcggcgaggatttc
gacaataggatggtgaaccatttcgtgcaggagttcaagaggaagcacaaaaaggacatc
agcggaaatccaagggctctgcggcggctcagaacggcctgtgagagggccaagaggact
ctctcctccaccgcgcagaccaccatcgagatcgattccctgtacgagggcatcgacttc
tactccacgatcacccgagctcgatttgaggagctcaacatggacctgttcaggaagtgt
atggagccagtcgagaagtgcttgagggatgcaaagatggacaagagtaacgtacacgac
gtcgtgctcgtcggcggatcgacgaggattcctaaagttcaacagctgctccaggacttc
ttcaacggcaaagagctctgcaagagcattaacccggacgaggccgttgcctatggcgcc
gccgtccaagcggctattcttagcggcgagggcaacgagaaggtgcaggaccttctcctg
ctcgatgtcacgcctctctcgctcggtttggagaccgctgggggagtcatgaccgtcttg
atcccgaggaacacgacgatccccaccaagaaggagcaaattttctccacctactccgac
aatcagcccggcgtcctgatccaggtctacgagggcgagagggcccggaccaaagacaac
aacttgctcggcaaattcgagctctccggcatccctccagcgccgagaggcgtccctcag
atcaacgtctgcttcgacatcgacgccaacggtatcctcaacgtctcagctgaggacaag
accaccgggcagaagaacaagatcaccatcaccaacgataagggcaggctgagcaaggaa
gatatcgagaagatggtgcacgaggcggagaagtacaaggccgaggacgaggagcataag
aagaaggtggaggccaagaacgccctcgagaactacgcttacaacatgaggaacaccatc
aaagacgagaagatcggcgccaagctgccagcggacgacaagaagaagatcgaagacgcc
atcgacaaggcgatcagctggttggaggggaatcagctggcagaggccgatgaatttgag
gacaaaatgaaggaactcgaaggcatctgcaaccccatcatcgccaagatgtatcagggc
ggcggcggcggcggtatgggcatggacgaagacatcccgacggctggtagtagcggcggc
gcggggccaaagatcgaggaagtcgattaa
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