Zingiber officinale (ginger): 122043396
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Entry
122043396 CDS
T08725
Name
(RefSeq) CSC1-like protein HYP1 isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122043396
Transporters [BR:
zof02000
]
Other transporters
Pores ion channels [TC:
1
]
122043396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
122043396
NCBI-ProteinID:
XP_042459916
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Position
2A:complement(174394018..174403335)
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AA seq
710 aa
AA seq
DB search
MIVSALLTSVGINFGLSVLFFALYSVLRKQSCNVKVYAPRLVAEGRARLRGRFSIETLLP
SAGWVRRAWQPTEEDLYNSCGLDGVVFSRIFVFSLRVFSLAAIIGIFVLLPVNYLGDHLR
NIDFSDLPNKSLDLFTISNVKDGSNWLWCHFSAAYIITGVMCYLLYAEYKYIAEKRIAYF
NASKPQPQHFTVLVRDIPLHAGNSLSDTVEAFFTEYHPSDYLSHSVVCRTSKLQGLITDA
EKVYRKLTHLKSTSSSSQNQNHSGFFGMFGKRVDLVRDYSKKLEDIEQNVRLVQSDSRRE
EVPAAFVSFKSRYGAAKALHIQQSVNPTEWVTEWAPEPRDVYWPFFSTSFMQRWISKLIV
FVASVLLVILFLLVVAFVQSLTYLEELEALFPFLGKILKITVISQVVTGYLPSLILHLVA
ALVPPIVKLFSAMQGYVAVSQIEKSACKKMLLFTIWFLFFANVLTGSVTSEIEFLFDPKT
IPSRLAVAVPAQASFFIAYVVTSWTSLSWKLNRTIPLISDFISRHCCRRKDDKFEIPSIP
YYSEIPRILLFVLLGLTYFLLAPMILPFILVFFCIGYIIYRNQLLDVYQPKYDTGGRFWP
VVHNSTIFSLVLMHIIAVGIFGVKKLPVAAILIVPLPVLTLLFNDYCRKRFLPVFRKFSA
ETLIKRDREDLSEPAMAEFLDELVTAYRDPAWMPIHHLSSDGEHTSPLLS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtctcggctcttctgacgtcggtggggatcaattttggcctcagcgtcctcttc
ttcgccctctactctgtgctccggaagcagtcttgcaacgtcaaagtctacgccccgcgg
ctcgtggcagagggccgcgcccgactccgcggccggttcagcatcgaaaccttgctgcct
tctgccggctgggtgcgtagggcatggcagcccaccgaggaagacctctacaactcgtgc
ggcctcgatggagtcgtcttcagtcgcatattcgtgttcagcttgagggttttttctctt
gctgcaatcataggaatattcgttctccttcctgttaattacttgggcgatcaccttcgg
aatatcgacttttctgatcttcccaacaagtctcttgatttgttcactatctcaaatgtg
aaagatggctctaattggttatggtgtcatttttctgctgcatacataataacaggtgtt
atgtgttaccttctgtatgctgagtataaatatatagcagagaagaggattgcttacttt
aatgcttcaaaaccacagccacaacattttactgtccttgttcgtgatattcctttgcat
gctgggaattctttaagtgacactgttgaagcattttttacagagtatcatccatcagac
tacttgtcccatagtgtggtttgccgaacaagcaagcttcaaggtctcataacagatgct
gagaaggtttataggaaactcacccacctgaaatcaacttccagttcctcacaaaatcaa
aatcatagtggcttctttgggatgtttggaaaacgtgttgatcttgtgcgtgattattcc
aagaaattggaagatatagaacagaatgtcagattagtgcagtcagactcacggagagag
gaagtccctgctgcttttgtttccttcaaatctcgatatggtgcagctaaggctcttcac
atccaacaatctgtcaatcccactgaatgggtgacagaatgggctcctgagcctcgtgat
gtatactggccctttttctctacatcgttcatgcaaagatggatttccaagttgatcgtc
tttgtggcatcagttctattagtaattttgttccttttagtggttgcttttgttcaaagt
ttaacttacttggaggaattggaggctttgtttccttttttggggaagatattgaaaata
actgtcatcagtcaggttgtaacaggttatctaccgagcctaattcttcacttggtggca
gctcttgtaccacctatagtgaagcttttctctgcaatgcaaggatatgttgccgttagt
cagattgagaaaagtgcatgcaaaaaaatgcttttgtttacaatatggttcctatttttt
gcaaatgtgctcaccggatcagttacaagtgaaatagagtttttatttgatccaaaaact
attccttcaaggttagctgttgcggtgcctgcacaggcttcatttttcattgcttatgtg
gtaacatcatggactagtttatcttggaaactcaatcgtacaatccctcttatcagtgat
ttcatttcaaggcactgttgcaggagaaaagatgacaaatttgaaataccatctatccca
tactacagtgaaataccaaggattctattatttgtgcttcttgggctcacttactttctt
ttagctccaatgatactgccatttatcttggttttcttctgcatcggttacattatctac
aggaatcagctgttagatgtttaccaacccaagtatgacacaggcggcaggttttggcct
gtggtgcataattctaccatcttctctctagtactgatgcatatcattgcagttggtata
tttggagtgaaaaagctacccgttgctgcaatcctaattgtgcctcttccagtgcttacc
ctcttgtttaatgactattgccgaaagcgattccttcctgttttccgcaaattctcggcc
gagactttgataaaaagagacagagaagatctgagcgagccagcaatggctgagttcttg
gacgagcttgtgactgcataccgcgatccagcatggatgcctattcatcatttgagctcg
gatggtgaacatacttctcccttactctcgtga
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